{"id":30629,"date":"2022-08-04T14:52:58","date_gmt":"2022-08-04T18:52:58","guid":{"rendered":"https:\/\/web.uri.edu\/riinbre\/?page_id=30629"},"modified":"2025-04-15T15:47:18","modified_gmt":"2025-04-15T19:47:18","slug":"mic-omics-data-analysis","status":"publish","type":"page","link":"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-bioinformatics-and-data-science\/mic-omics-data-analysis\/","title":{"rendered":"MIC Omics Data Analysis"},"content":{"rendered":"<section class=\"cl-wrapper cl-menu-wrapper\"><nav id=\"\" class=\"cl-menu  \" data-name=\"MIC-Services\" data-show-title=\"0\"><ul id=\"menu-mic-services\" class=\"cl-menu-list cl-menu-list-no-js\"><li id=\"menu-item-30150\" class=\"menu-item menu-item-type-post_type menu-item-object-page menu-item-30150\"><a href=\"https:\/\/web.uri.edu\/riinbre\/mic\/\">Rhode Island INBRE Molecular Informatics Core (MIC)<\/a><\/li>\n<li id=\"menu-item-30184\" class=\"menu-item menu-item-type-post_type menu-item-object-page menu-item-30184\"><a href=\"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-bioinformatics-and-data-science\/\">Bioinformatics and Data Science Analysis<\/a><\/li>\n<li id=\"menu-item-30178\" class=\"menu-item menu-item-type-post_type menu-item-object-page menu-item-30178\"><a href=\"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-sequencing-services\/\">Sequencing<\/a><\/li>\n<li id=\"menu-item-30189\" class=\"menu-item menu-item-type-post_type menu-item-object-page menu-item-30189\"><a href=\"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-molecular-modeling-services\/\">Molecular Modeling<\/a><\/li>\n<li id=\"menu-item-30183\" class=\"menu-item menu-item-type-post_type menu-item-object-page menu-item-30183\"><a href=\"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-vr\/\">Virtual\/Augmented Reality &amp; 3D Printing<\/a><\/li>\n<\/ul><\/nav><\/section>\n<h1>Omics Data Analysis<\/h1>\n<p>In addition to genomics data, the MIC also offers services in analysis of other omics datasets generated by the CRCF or other sources including proteomics, metabolomics and lipidomics, and single cell and spatial omics.&nbsp; Our analyses typically utilize the R Bioconductor <a href=\"https:\/\/bioconductor.org\/packages\/release\/bioc\/html\/limma.html\" target=\"_blank\" rel=\"noopener\">limma<\/a> package as well as other R packages.&nbsp; We also encourage you to visit the <a href=\"https:\/\/idearesourceproteomics.org\/\" target=\"_blank\" rel=\"noopener\">IDeA National Resource for Quantitative Proteomics<\/a> operated by Arkansas INBRE and Oklahoma INBRE who offer a variety of tools for generation and analysis of proteomics data.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Omics Data Analysis In addition to genomics data, the MIC also offers services in analysis of other omics datasets generated by the CRCF or other sources including proteomics, metabolomics and lipidomics, and single cell and spatial omics.&nbsp; Our analyses typically utilize the R Bioconductor limma package as well as other R packages.&nbsp; We also encourage [&hellip;]<\/p>\n","protected":false},"author":3192,"featured_media":0,"parent":29454,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-30629","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/30629","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/users\/3192"}],"replies":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/comments?post=30629"}],"version-history":[{"count":4,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/30629\/revisions"}],"predecessor-version":[{"id":37357,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/30629\/revisions\/37357"}],"up":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/29454"}],"wp:attachment":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/media?parent=30629"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}