{"id":31867,"date":"2022-02-25T12:08:44","date_gmt":"2022-02-25T17:08:44","guid":{"rendered":"https:\/\/web.uri.edu\/riinbre\/?page_id=31867"},"modified":"2025-04-15T15:49:04","modified_gmt":"2025-04-15T19:49:04","slug":"molecular-modeling-software","status":"publish","type":"page","link":"https:\/\/web.uri.edu\/riinbre\/mic\/mic-services-and-resources\/mic-molecular-modeling-services\/molecular-modeling-software\/","title":{"rendered":"Molecular Modeling Software"},"content":{"rendered":"<p>We&nbsp; utilize a variety of open source tools including:<\/p>\n<p><a href=\"https:\/\/www.cgl.ucsf.edu\/chimera\/\" target=\"_blank\" rel=\"noopener\">USCF Chimera <\/a>and <a href=\"https:\/\/www.cgl.ucsf.edu\/chimerax\/\" target=\"_blank\" rel=\"noopener\">USCF ChimeraX<\/a> &#8211; Popular tools for molecular visualizations.&nbsp; We use Chimera for 3D printing of molecules and ChimeraX for VR visualization.<\/p>\n<p><a href=\"https:\/\/nanome.ai\/\" target=\"_blank\" rel=\"noopener\">Nanome<\/a> &#8211; Molecular visualization in virtual reality.&nbsp; Nanome includes docking and virtual room functionalities.<\/p>\n<p><a href=\"http:\/\/www.baaden.ibpc.fr\/umol\/\" target=\"_blank\" rel=\"noopener\">UnityMol<\/a> &#8211; Molecular viewer and prototyping platform for use in molecular visualizations in Unity (VR).<\/p>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>We&nbsp; utilize a variety of open source tools including: USCF Chimera and USCF ChimeraX &#8211; Popular tools for molecular visualizations.&nbsp; We use Chimera for 3D printing of molecules and ChimeraX for VR visualization. Nanome &#8211; Molecular visualization in virtual reality.&nbsp; Nanome includes docking and virtual room functionalities. UnityMol &#8211; Molecular viewer and prototyping platform for [&hellip;]<\/p>\n","protected":false},"author":3192,"featured_media":0,"parent":29465,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":"","_links_to":"","_links_to_target":""},"class_list":["post-31867","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/31867","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/users\/3192"}],"replies":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/comments?post=31867"}],"version-history":[{"count":4,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/31867\/revisions"}],"predecessor-version":[{"id":37359,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/31867\/revisions\/37359"}],"up":[{"embeddable":true,"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/pages\/29465"}],"wp:attachment":[{"href":"https:\/\/web.uri.edu\/riinbre\/wp-json\/wp\/v2\/media?parent=31867"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}