* graduate student co-author, ** undergraduate student co-author<\/p>\n\n\n\n
*Alexander, H, B. Jenkins, T. Rynearson<\/strong>, S. Dyhrman (2015) Metatranscriptome analyses indicate resource partitioning between diatoms in the field. Proceedings of the National Academy of Sciences, doi: 10.1073\/pnas.1421993112<\/a><\/p>\n\n\n\n Keeling, P.J., Burki, F., Wilcox, H.M., Allam, B., Allen, E.E., Amaral-Zettler, L.A., Armbrust, E.V., Archibald, J.M., Bharti, A.K., Bell, C.J., Beszteri, B., Bidle, K.D., Cameron, C.T., Campbell, L., Caron, D.A., Cattolico, R.A., Collier, J.L., Coyne, K., Davy, S.K., Deschamps, P., Dyhrman, S.T., Edvardsen, B., Gates, R.D., Gobler, C.J., Greenwood, S.J., Guida, S.M., Jacobi, J.L., Jakobsen, K.S., James, E.R., Jenkins, B., John, U., Johnson, M.D., Juhl, A.R., Kamp, A., Katz, L.A., Kiene, R., Kudryavtsev, A., Leander, B.S., Lin, S., Lovejoy, C., Lynn, D., Marchetti, A., McManus, G., Nedelcu, A.M., Menden-Deuer, S., Miceli, C., Mock, T., Montresor, M., Moran, M.A., Murray, S., Nadathur, G., Nagai, S., Ngam, P.B., Palenik, B., Pawlowski, J., Petroni, G., Piganeau, G., Posewitz, M.C., Rengefors, K., Romano, G., Rumpho, M.E., Rynearson, T<\/strong>., Schilling, K.B., Schroeder, D.C., Simpson, A.G.B., Slamovits, C.H., Smith, D.R., Smith, G.J., Smith, S.R., Sosik, H.M., Stief, P., Theriot, E., Twary, S.N., Umale, P.E., Vaulot, D., Wawrik, B., Wheeler, G.L., Wilson, W.H., Xu, Y., Zingone, A., Worden, A.Z., 2014. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing. PLoS Biol 12 (6), e1001889.<\/a><\/p>\n\n\n\n *Alexander, H., Jenkins, B.D., Rynearson<\/strong>, T.A., Saito, M.A., Mercier, M.L.\u202f Dyhrman, S.T., (2012) Identifying reference genes with stable expression from high throughput sequence data. Frontiers in Aquatic Microbiology. doi: 10.3389\/fmicb.2012.00385<\/a><\/p>\n\n\n\n #Dyhrman, S., #B. Jenkins, #T. Rynearson<\/strong>, #M. Saito, *M. Mercier, *H. Alexander, *L. Whitney, A. Drzewianowski, V. Bulygin, *E. Bertrand, Z. Wu, C. Benitez-Nelson, and A. Heithoff. (2012) The transcriptome and proteome of the diatom Thalassiosira pseudonana<\/em> reveal a diverse Phosphorus stress response. PLoS One 7<\/strong>:e33768<\/a><\/p>\n\n\n\n # Authors contributed equally to the work<\/p>\n\n\n\n Rynearson<\/strong>, T.A. and B. Palenik. (2011) Learning to read the oceans: Genomics of marine phytoplankton. <\/em>Advances in Marine Biology, Vol 60:1-39<\/a><\/p>\n\n\n\n Wu, Z., Jenkins, B. D., Rynearson<\/strong>, T. A., Dyhrman, S. T., Saito, M. A., *Mercier, M. & *Whitney, L. (2010) Empirical Bayes Analysis of Sequencing-based Transcriptional Profiling Without Replicates. BMC Bioinformatics. 11(1): 564<\/a><\/p>\n\n\n\n Bowler, C, AE Allen, JH Badger, J Grimwood, K Jabbari, A Kuo, U Maheswari, C Martens, F Maumus, RP Otillar, E Rayko, A Salamov, K Vandepoele, B Beszteri, A Gruber, M Heijde, M Katinka, T Mock, K Valentin, F V\u00e9rret, JA Berges, C Brownlee, J Cadoret, A Chiovitti, CJ Choi, S Coesel, A De Martino, JC Detter, C Durkin, A Falciatore, J Fournet, M Haruta, M Huysman, BD Jenkins, K Jiroutova, RE Jorgensen, Y Joubert, A Kaplan, N Kroeger, P Kroth, J La Roche, E Lindquist, M Lommer,V Martin-J\u00e9z\u00e9quel, PJ Lopez, S Lucas, M Mangogna, K McGinnis, LK. Medlin, A Montsant, M Oudot-Le Secq, C Napoli, M Obornik, J Petit, BM. Porcel, N Poulsen, M Robison, L Rychlewsk, TA Rynearson<\/strong>, J Schmutz, M Schnitzler Parker, H Shapiro, M Siaut, M Stanley, MJ Sussman, A Taylor, A Vardi, P von Dassow, W Vyverman, A Willis, LS Wyrwicz, DS Rokhsar, J Weissenbach, EV Armbrust, BR Green, Y Van de Peer, IV Grigoriev. (2008) The Phaeodactylum genome reveals the dynamic nature and multi-lineage evolutionary history of diatom genomes. Nature, 455 (7216) DOI 10.1038\/nature07410<\/a><\/p>\n\n\n\n Armbrust, E.V., Rynearson<\/strong>, T.A. and Jenkins. (2006) Genomic insights into diatom evolution and metabolism. In<\/em> Genomics and Evolution of Microbial Eukaryotes, Eds. Katz, L.A. and Bhattacharya, D. 201-213<\/a><\/p>\n\n\n\n Armbrust, E. V., J. A. Berges, C. Bowler, B. R. Green, D. Martinez, N. H. Putnam, S. G. Zhou, A. E. Allen, K. E. Apt, M. Bechner, M. A. Brzezinski, B. K. Chaal, A. Chiovitti, A. K. Davis, M. S. Demarest, J. C. Detter, T. Glavina, D. Goodstein, M. Z. Hadi, U. Hellsten, M. Hildebrand, B. D. Jenkins, J. Jurka, V. V. Kapitonov, N. Kroger, W. W. Y. Lau, T. W. Lane, F. W. Larimer, J. C. Lippmeier, S. Lucas, M. Medina, A. Montsant, M. Obornik, M. S. Parker, B. Palenik, G. J. Pazour, P. M. Richardson, T. A. Rynearson<\/strong>, M. A. Saito, D. C. Schwartz, K. Thamatrakoln, K. Valentin, A. Vardi, F. P. Wilkerson, and D. S. Rokhsar. (2004) The genome of the diatom Thalassiosira pseudonana<\/em>: Ecology, evolution and metabolism. Science 306: 79-86, 10.1126\/science.1101156<\/a><\/p>\n","protected":false},"excerpt":{"rendered":" * graduate student co-author, ** undergraduate student co-author *Alexander, H, B. Jenkins, T. Rynearson, S. Dyhrman (2015) Metatranscriptome analyses indicate resource partitioning between diatoms in the field. 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