Release of Curated Data Repository v8 to the All of Us Researcher Workbench The All of Us Research Program released the Curated Data Repository (CDR) version 8 for Controlled Tier and Registered Tier data. The CDRv8 for both tiers (Controlled Tier C2024Q3R4 and Registered Tier R2024Q3R3) includes participant data with a cutoff date of October 1, 2023. Link
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General Bioinformatics
10X Genomics Instrument Workflow Training
The CRCF and MIC will offer introductory workflow training for our new 10X Genomics instruments on November 12. These trainings describe the workflows involved in single cell and/or spatial omics experiments and may be attended in-person or virtually. In-depth hands on training with the instruments will be provided at a later date (ideally all before […]
Continue reading "10X Genomics Instrument Workflow Training"10X Genomics Chromium X and Visium CytAssist Training Survey
If you are interested in training on the new 10X Genomics instruments, please take the following survey. Group trainings will be conducted in November 2024.
Continue reading "10X Genomics Chromium X and Visium CytAssist Training Survey"2024 Newsletter – Single Cell
RI-INBRE Acquires Advanced Instrumentation for Single Cell and Spatial Omics Research We have completed the purchase of new 10X Genomics Chromium X single-cell omics system and a 10X Genomics Visium CytAssist instruments which are housed in the CRCF. These instruments will allow our cores to offer services in single-cell omics and discovery-level spatial omics. This […]
Continue reading "2024 Newsletter – Single Cell"Next-Gen Sequencing and Omics Data Analysis (WDT 2023)
RI-INBRE Workforce Development Training (WDT) Summer 2023 Syllabus Module Title: Next-Gen Sequencing and Omics Data Analysis Instructor: Christopher Hemme, PhD, and Janet Atoyan, MS Course Overview This WDT Module aims to train students in next-generation sequencing (NGS) and omics data analysis methods. The module will include lectures on NGS methods, hands-on laboratory experience with library […]
Continue reading "Next-Gen Sequencing and Omics Data Analysis (WDT 2023)"Implementation Changes for Genomic Data Sharing Plans Included with Applications Due on or after January 25, 2023
NIH continues to work with the biomedical research community to promote effective and responsible management and sharing of scientific data generated from NIH-funded or conducted research. In an effort to reduce the burden of duplicative reporting expectations, NIH is informing the research community of its intent to establish a single Plan submission requirement for research […]
Continue reading "Implementation Changes for Genomic Data Sharing Plans Included with Applications Due on or after January 25, 2023"Sequencing Update
Sequencing Update Winter 2023 It has been a year and a half since the merger of the URI Genomics and Sequencing Center (GSC) with the RI-INBRE Bioinformatics Core to form the RI-INBRE Molecular Informatics Core (MIC), we have closely monitored usage to ensure that we are providing sufficient services to our customers. Our two primary […]
Continue reading "Sequencing Update"Molecular Informatics Core
Molecular Informatics Core (MIC) On July 1, 2021, the RI-INBRE Bioinformatics Core joined resources with the URI Genomics and Sequencing Center (GSC) to form the new RI-INBRE Molecular Informatics Core (MIC). The MIC is structured according to the new National Institutes of Health INBRE directive to maintain a Data Sciences Core for Biomedical Research. The […]
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