GSO Scientific Publications

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Bold text indicates a GSO Graduate Student.


Marshall, R.C., Fisher, J.A.D., Gatti, P., Carruthers, E.H., Robert, D., Le Bris, A., 2023. Combining electronic tag data and fish harvesters’ knowledge to identify ocean management concerns. Marine Policy 147, 105393.


Al-Mamun, M.A., Strock, J., Sharker, Y., Shawwa, K., Schmidt, R., Slain, D., Sakhuja, A., Brothers, T.N., 2022. Evaluating the Medication Regimen Complexity Score as a Predictor of Clinical Outcomes in the Critically Ill. Journal of Clinical Medicine 11, 4705.

Anderson, S.I., Franzè, G., Kling, J.D., Wilburn, P., Kremer, C.T., Menden-Deuer, S., Litchman, E., Hutchins, D.A., Rynearson, T.A., 2022. The interactive effects of temperature and nutrients on a spring phytoplankton community. Limnology and Oceanography 67, 634–645.

Agarwal, V., Inomura, K., Mouw, C.B., 2022. Quantitative Analysis of the Trade-Offs of Colony Formation for Trichodesmium. Microbiology Spectrum 0, e02025-22.

Armin, G., Inomura, K., 2022. Modeling the elemental stoichiometry and silicon accumulation in diatoms. Current Research in Microbial Sciences 3, 100164.

Arizi, E.K., Collie, J.S., Castro, K., Humphries, A.T., 2022. Fishing characteristics and catch composition of the sardinella fishery in Ghana indicate urgent management is needed. Regional Studies in Marine Science 102348.

Ayvazian, S.G., Ray, N.E., Gerber-Williams, A., Grabbert, S., Pimenta, A., Hancock, B., Cobb, D., Strobel, C., Fulweiler, R.W., 2022. Evaluating Connections Between Nitrogen Cycling and the Macrofauna in Native Oyster Beds in a New England Estuary. Estuaries and Coasts 45, 196–212.

Benavides, M., Bonnet, S., Le Moigne, F.A.C., Armin, G., Inomura, K., Hallstrøm, S., Riemann, L., Berman-Frank, I., Poletti, E., Garel, M., Grosso, O., Leblanc, K., Guigue, C., Tedetti, M., Dupouy, C., 2022. Sinking Trichodesmium fixes nitrogen in the dark ocean. ISME J 1–8.

Bishop, I.W., Anderson, S.I., Collins, S., Rynearson, T.A., 2022. Thermal trait variation may buffer Southern Ocean phytoplankton from anthropogenic warming. Global Change Biology.

Beulig, F., Schubert, F., Adhikari, R.R., Glombitza, C., Heuer, V.B., Hinrichs, K.-U., Homola, K.L., Inagaki, F., Jørgensen, B.B., Kallmeyer, J., Krause, S.J.E., Morono, Y., Sauvage, J., Spivack, A.J., Treude, T., 2022. Rapid metabolism fosters microbial survival in the deep, hot subseafloor biosphere. Nature Communications 13, 312.

Bontempi, P., 2022. An Ambitious Vision for the Future of Scientific Ocean. Eos.

Breusing, C., Castel, J., Yang, Y., Broquet, T., Sun, J., Jollivet, D., Qian, P., Beinart, R.A., 2022. Global 16S rRNA diversity of provannid snail endosymbionts from Indo-Pacific deep-sea hydrothermal vents. Environmental Microbiology Reports 1.

Breusing, C., Genetti, M., Russell, S.L., Corbett-Detig, R.B., Beinart, R.A., 2022. Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses. Proceedings of the National Academy of Sciences U.S.A. 119, 1–11.

Breusing, C., Klobusnik, N.H., Hauer, M.A., Beinart, R.A., 2022. Genome assembly of the chemosynthetic endosymbiont of the hydrothermal vent snail Alviniconcha adamantis from the Mariana Arc. G3: Genes | Genomes | Genetics 12, 1–8.

Breusing, C., Osborn, K.J., Girguis, P.R., Reese, A.T., 2022. Composition and metabolic potential of microbiomes associated with mesopelagic animals from Monterey Canyon. ISME Communications. 2, 1–14.

Brumovský, M., Bečanová, J., Sáňka, O., Løken, K.B., Baho, D.L., Sørensen, K., Nizzetto, L., 2022. Line ferries and cargo ships for the monitoring of marine contaminants of emerging concern: Application along a Europe-Arctic transect. Journal of Hazardous Materials 424, 127232.

Castel, J., Hourdez, S., Pradillon, F., Daguin-Thiébaut, C., Ballenghien, M., Ruault, S., Corre, E., Tran Lu Y, A., Mary, J., Gagnaire, P.-A., Bonhomme, F., Breusing, C., Broquet, T., Jollivet, D., 2022. Inter-Specific Genetic Exchange Despite Strong Divergence in Deep-Sea Hydrothermal Vent Gastropods of the Genus Alviniconcha. Genes 13, 985.

Chafik, L., Holliday, N.P., Bacon, S., Rossby, T., 2022. Irminger Sea is the Center of Action for Subpolar AMOC Variability. Geophysical Research Letters 2022, e2022GL099133.

Chen, Y., Qiu, D., Cornillon, P., Wu, M., 2022. Chlorophyll bloom enhanced by a mesoscale eddy in the western South China Sea. Frontiers of Earth Science

Closset, I., Brzezinski, M.A., Cardinal, D., Dapoigny, A., Jones, J.L., Robinson, R.S., 2022. A silicon isotopic perspective on the contribution of diagenesis to the sedimentary silicon budget in the Southern Ocean. Geochimica et Cosmochimica Acta 327, 298–313.

Collie, J., Schumann, S., Masury, K., Uchida, H., Collie, C., 2022. Balancing Ecosystems, Harvests, and Seafood Markets. Fisheries.

Cooper, L., Plank, T., Arculus, R., Hauri, E., Kelley, K.A., 2022. Arc–Backarc Exchange Along the Tonga-Lau System: Constraints from Volatile Elements. Journal of Petrology egac072.

Cutler, K.S., Watt, S.F.L., Cassidy, M., Madden-Nadeau, A.L., Engwell, S.L., Abdurrachman, M., Nurshal, M.E.M., Tappin, D.R., Carey, S.N., Novellino, A., Hayer, C., Hunt, J.E., Day, S.J., Grilli, S.T., Kurniawan, I.A., Kartadinata, N., 2022. Downward-propagating eruption following vent unloading implies no direct magmatic trigger for the 2018 lateral collapse of Anak Krakatau. Earth & Planetary Science Letters 578

D’Angelo, A., Garcia-Eidell, C., Knowlton, C., Gingras, A., Morin, H., Coleman, D., Kaelblein, J., Raziuddin, H., VanKeersbilck, N., Rivera, T.J., Kopka, K., Boleaga, Y., Estes, K., Nodal, A., Schulze, E., Ewa, T., Shaban, M., Umar, S., Santana, R., Strock, J., 2022. Water masses distribution in the Canadian Arctic Archipelago: Implementation of the Optimal MultiParameter analysis (OMP). Earth System Science Data Discussions 1–24.

Deutsch, C., Penn, J.L., Verberk, W.C.E.P., Inomura, K., Endress, M.-G., Payne, J.L., 2022. Impact of warming on aquatic body sizes explained by metabolic scaling from microbes to macrofauna. Proceedings of the National Academy of Sciences U.S.A. 119, e2201345119.

Durkin, C.A., Cetinić, I., Estapa, M., Ljubešić, Z., Mucko, M., Neeley, A., Omand, M., 2022. Tracing the path of carbon export in the ocean though DNA sequencing of individual sinking particles. ISME J 1–11.

Farmer, N.A., Garrison, L.P., Horn, C., Miller, M., Gowan, T., Kenney, R.D., Vukovich, M., Willmott, J.R., Pate, J., Harry Webb, D., Mullican, T.J., Stewart, J.D., Bassos-Hull, K., Jones, C., Adams, D., Pelletier, N.A., Waldron, J., Kajiura, S., 2022. The distribution of manta rays in the western North Atlantic Ocean off the eastern United States. Scientific Reports 12, 6544.

Galligan, B.P., Stuart, Y.E., McManus, M.C., Stoffel, H.E., 2022. Hypoxia-induced predation refuge for northern quahogs (Mercenaria mercenaria) in a temperate estuary. Estuarine Coastal & Shelf Science 265.

Gardiner, C., Robuck, A., Becanova, J., Cantwell, M., Kaserzon, S., Katz, D., Mueller, J., Lohmann, R., 2022. Field Validation of a Novel Passive Sampler for Dissolved PFAS in Surface Waters. Environmental Toxicology and Chemistry.

Gonçalves Neto, A., 2022. Post publication careers: communication, engagement and impact. Communications Earth & Environment 3, 1–2.

Heinichen, M., McManus, M.C., Lucey, S.M., Aydin, K., Humphries, A., Innes-Gold, A., Collie, J., 2022. Incorporating temperature-dependent fish bioenergetics into a Narragansett Bay food web model. Ecological Modelling 466,

Hemraj, D.A., Bishop, M.J., Hancock, B., Minuti, J.J., Thurstan, R.H., Zu Ermgassen, P.S.E., Russell, B.D., 2022. Oyster reef restoration fails to recoup global historic ecosystem losses despite substantial biodiversity gain. Science Advances 8, eabp8747.

Hudson, D.M., Krumholz, J.S., Pochtar, D.L., Dickenson, N.C., Dossot, G., Phillips, G., Baker, E.P., Moll, T.E., 2022. Potential impacts from simulated vessel noise and sonar on commercially important invertebrates. PeerJ 10, e12841.

Humphries, A., Gorospe, K., Innes-Gold, A., McNamee, J., McManus, C., Oviatt, C., Collie, J., 2022. In Pursuit of Ecosystem-Based Management for Narragansett Bay: An Overview of Previous Models and Roadmap for Future Research. Coastal Management, 1–22.

Husain, N.T., Hara, T., Sullivan, P.P., 2022. Wind Turbulence over Misaligned Surface Waves and Air–Sea Momentum Flux. Part II: Waves in Oblique Wind. Journal of Physical Oceanography 52, 141–159.

Inomura, K., Deutsch, C., Jahn, O., Dutkiewicz, S., Follows, M.J., 2022. Global patterns in marine organic matter stoichiometry driven by phytoplankton ecophysiology. Nature Geoscience 1–7.

Kassah, J., Blay, J., Okyere, I., Lazar, N., 2022. Maturity length, fecundity and spawning season of Atlantic chub mackerel Scomber colias in the coastal waters of Ghana (west-central Gulf of Guinea). African Journal of Marine Science 44, 291–298.

Katz, D.R., Sullivan, J.C., Rosa, K., Gardiner, C.L., Robuck, A.R., Lohmann, R., Kincaid, C., Cantwell, M.G., 2022. Transport and fate of aqueous film forming foam in an urban estuary. Environmental Pollution 300, 118963.

Kerrigan, Z., D’Hondt, S., 2022. Patterns of Relative Bacterial Richness and Community Composition in Seawater and Marine Sediment Are Robust for Both Operational Taxonomic Units and Amplicon Sequence Variants. Frontiers in Microbiology 13.

Kilbourne, K.H., Wanamaker, A.D., Moffa-Sanchez, P., Reynolds, D.J., Amrhein, D.E., Butler, P.G., Gebbie, G., Goes, M., Jansen, M.F., Little, C.M., Mette, M., Moreno-Chamarro, E., Ortega, P., Otto-Bliesner, B.L., Rossby, T., Scourse, J., Whitney, N.M., 2022. Atlantic circulation change still uncertain. Nature Geoscience 15, 165–167.

Kim, J., Armin, G., Inomura, K., 2022. Saturating relationship between phytoplankton growth rate and nutrient concentration explained by macromolecular allocation. Current Research in Microbial Sciences 3, 100167.

Kouhi, S., Hashemi, M.R., Spaulding, M., Hara, T., 2022. Modeling the impact of sea level rise on maximum water elevation during storm surge events: a closer look at coastal embayments. Climatic Change 171, 1–20.

Krasnosky, K., Roman, C., 2022. A Massively Parallel Implementation of Gaussian Process Regression for Real Time Bathymetric Modeling and Simultaneous Localization and Mapping. Field Robotics 2, 940–970.

Kristan, A.K., Maiti, K., McMahon, K.W., Dance, M.A., Polito, M.J., 2022. Biological and geochemical proxies in sediment cores reveal shifts in marine predator population dynamics relative to historic anthropogenic exploitation and recent climate change at South Georgia Island sub-Antarctic. Polar Biology.

LaFrance Bartley, M., Borrelli, M., 2022. Introduction to Special Issue “Shallow Water Mapping in Coastal Environments: Recent Research, Current Technologies, and Multi-modal Approaches.” Estuaries and Coasts.

LaFrance Bartley, M., King, J.W., Oakley, B.A., Caccioppoli, B.J., 2022. Post-Hurricane Sandy Benthic Habitat Mapping at Fire Island National Seashore, New York, USA, Utilizing the Coastal and Marine Ecological Classification Standard (CMECS). Estuaries and Coasts.

Langan, J.A., Bell, R.J., Collie, J.S., 2022. Taking stock: Is recovery of a depleted population possible in a changing climate? Fisheries Oceanography 1.

Langan, J.A., Collie, J.S., Minto, C., 2022. Detecting Population Regulation of Winter Flounder from Noisy Data. Canadian Journal of Fisheries and Aquatic Sciences.

Legault, C.M., Wiedenmann, J., Deroba, J.J., Fay, G., Miller, T.J., Brooks, E.N., Bell, R.J., Langan, J.A., Cournane, J.M., Jones, A.W., Muffley, B., 2022. Data Rich but Model Resistant: An Evaluation of Data-Limited Methods to Manage Fisheries with Failed Age-based Stock Assessments. Canadian Journal of Fisheries and Aquatic Sciences

Light, C.X., Arbic, B.K., Martin, P.E., Brodeau, L., Farrar, J.T., Griffies, S.M., Kirtman, B.P., Laurindo, L.C., Menemenlis, D., Molod, A., Nelson, A.D., Nyadjro, E., O’Rourke, A.K., Shriver, J.F., Siqueira, L., Small, R.J., Strobach, E., 2022. Effects of grid spacing on high-frequency precipitation variance in coupled high-resolution global ocean–atmosphere models. Climate Dynamics 1–27.

Luo, W., Inomura, K., Zhang, H., Luo, Y.-W., 2022. N2 Fixation in Trichodesmium Does Not Require Spatial Segregation from Photosynthesis. mSystems 0, e00538-22.

Lynton, S.J., Rose, T.R., Andrys, J.L., Kelley, K.A., Andrews, B.J., 2022. Evidence for transitional and mildly alkalic eruptions during Hawai’i’s dominantly tholeiitic shield-building stage: Insights from the Kulanaokuaiki Tephra (≥1.0 ka) at Kīlauea Volcano, HI. Journal of Volcanology & Geothermal Research 429,

Ma, Y., Luo, Y., Zhu, J., Zhang, J., Gao, G., Mi, W., Xie, Z., Lohmann, R., 2022. Seasonal variation and deposition of atmospheric organophosphate esters in the coastal region of Shanghai, China. Environmental Pollution 300, 118930.

Maniscalco, M.A., Brzezinski, M.A., Lampe, R.H., Cohen, N.R., McNair, H.M., Ellis, K.A., Brown, M., Till, C.P., Twining, B.S., Bruland, K.W., Marchetti, A., Thamatrakoln, K., 2022. Diminished carbon and nitrate assimilation drive changes in diatom elemental stoichiometry independent of silicification in an iron-limited assemblage. ISME Communications 2, 1–10.

Masuda, T., Inomura, K., Gao, M., Armin, G., Kotabová, E., Bernát, G., Lawrenz-Kendrick, E., Lukeš, M., Bečková, M., Steinbach, G., Komenda, J., Prášil, O., 2023. The balance between photosynthesis and respiration explains the niche differentiation between Crocosphaera and Cyanothece. Computational and Structural Biotechnology Journal 21, 58–65.

Masuda, T., Inomura, K., Kodama, T., Shiozaki, T., Kitajima, S., Armin, G., Matsui, T., Suzuki, K., Takeda, S., Sato, M., Prášil, O., Furuya, K., 2022. Crocosphaera as a Major Consumer of Fixed Nitrogen. Microbiology Spectrum 0, e02177-21.

McAfee, D., McLeod, I.M., Alleway, H.K., Bishop, M.J., Branigan, S., Connell, S.D., Copeland, C., Crawford, C.M., Diggles, B.K., Fitzsimons, J.A., Gilby, B.L., Hamer, P., Hancock, B., Pearce, R., Russell, K., Gillies, C.L., 2022. Turning a lost reef ecosystem into a national restoration program. Conservation Biology

Mauzole, Y.L., 2022. Objective delineation of persistent SST fronts based on global satellite observations. Remote Sensing of Environment 269, 112798.

Meyer-Gutbrod, E.L., Davies, K.T.A., Johnson, C.L., Plourde, S., Sorochan, K.A., Kenney, R.D., Ramp, C., Gosselin, J.-F., Lawson, J.W., Greene, C.H., 2022. Redefining North Atlantic right whale habitat-use patterns under climate change. Limnology and Oceanography.

Mock, T., Boulton, W., Balmonte, J.-P., Barry, Kevin, Bertilsson, S., Bowman, J., Buck, M., Bratbak, G., Chamberlain, E.J., Cunliffe, M., Creamean, J., Ebenhöh, O., Eggers, S.L., Fong, A.A., Gardner, J., Gradinger, R., Granskog, M.A., Havermans, C., Hill, T., Hoppe, C.J.M., Korte, K., Larsen, A., Müller, O., Nicolaus, A., Oldenburg, E., Popa, O., Rogge, S., Schäfer, H., Shoemaker, K., Snoeijs-Leijonmalm, P., Torstensson, A., Valentin, K., Vader, A., Barry, Kerrie, Chen, I.-M.A., Clum, A., Copeland, A., Daum, C., Eloe-Fadrosh, E., Foster, Brian, Foster, Bryce, Grigoriev, I.V., Huntemann, M., Ivanova, N., Kuo, A., Kyrpides, N.C., Mukherjee, S., Palaniappan, K., Reddy, T.B.K., Salamov, A., Roux, S., Varghese, N., Woyke, T., Wu, D., Leggett, R.M., Moulton, V., Metfies, K., 2022. Multiomics in the central Arctic Ocean for benchmarking biodiversity change. PLOS Biology 20, e3001835.

Moisander, P.H., Daley, M.C., Shoemaker, K.M., Kolte, V., Sharma, G., Garlick, K., 2022. Nitrogen Fixation Influenced by Phosphorus and Nitrogen Availability in the Benthic Bloom-forming Cyanobacterium Hydrocoleum sp. Identified in a Temperate Marine Lagoon. Journal of Phycology 1.

Nickford, S., Palter, J.B., Donohue, K., Fassbender, A.J., Gray, A.R., Long, J., Sutton, A.J., Bates, N.R., Takeshita, Y., 2022. Autonomous Wintertime Observations of Air-Sea Exchange in the Gulf Stream Reveal a Perfect Storm for Ocean CO2 Uptake. Geophysical Research Letters 49, 1–9.

O’Brien, O., Pendleton, D.E., Ganley, L.C., McKenna, K.R., Kenney, R.D., Quintana-Rizzo, E., Mayo, C.A., Kraus, S.D., Redfern, J.V., 2022. Repatriation of a historical North Atlantic right whale habitat during an era of rapid climate change. Scientific Reports 12, 1–10.

Okay Günaydın, S., Sorlien, C.C., Cormier, M.-H., Barın, B., Seeber, L., Steckler, M.S., Çifci, G., Dondurur, D., Kurt, H., Küçük, H.M., Atgın, O., Özel, Ö., 2022. Post-500 ka and Holocene activity on distributed faults of the North Anatolian Fault system along the southern shelf of Marmara Sea, Turkey. Tectonophysics 840.

Orenstein, E.C., Ayata, S.-D., Maps, F., Becker, É.C., Benedetti, F., Biard, T., de Garidel-Thoron, T., Ellen, J.S., Ferrario, F., Giering, S.L.C., Guy-Haim, T., Hoebeke, L., Iversen, M.H., Kiørboe, T., Lalonde, J.-F., Lana, A., Laviale, M., Lombard, F., Lorimer, T., Martini, S., Meyer, A., Möller, K.O., Niehoff, B., Ohman, M.D., Pradalier, C., Romagnan, J.-B., Schröder, S.-M., Sonnet, V., Sosik, H.M., Stemmann, L.S., Stock, M., Terbiyik-Kurt, T., Valcárcel-Pérez, N., Vilgrain, L., Wacquet, G., Waite, A.M., Irisson, J.-O., 2022. Machine learning techniques to characterize functional traits of plankton from image data. Limnology and Oceanography.

Oviatt, C., Stoffel, H., Huizenga, K., Reed, L., Codiga, D., Fields, L., 2022. A tale of two spring blooms in a northeast estuary of the USA: how storms impact nutrients, multiple trophic levels and hypoxia. Hydrobiologia 1–18.

Perez, M., Breusing, C., Angers, B., Beinart, R.A., Won, Y.-J., Young, C.R., 2022. Divergent paths in the evolutionary history of maternally transmitted clam symbionts. Proceedings of the Royal Society B: Biological Sciences 289, 20212137.

Pickard, H.M., Ruyle, B.J., Thackray, C.P., Chovancova, A., Dassuncao, C., Becanova, J., Vojta, S., Lohmann, R., Sunderland, E.M., 2022. PFAS and Precursor Bioaccumulation in Freshwater Recreational Fish: Implications for Fish Advisories. Environmental Science and Technology

Pimentel, Z.T., Thibodeau, P.S., Song, B., Zhang, Y., 2022. A Mollicutes Metagenome-Assembled Genome from the Gut of the Pteropod Limacina rangii. Microbiology Resource Announcements, e00752-22.

Pitcher, C.R., Hiddink, J.G., Jennings, S., Collie, J., Parma, A.M., Amoroso, R., Mazor, T., Sciberras, M., McConnaughey, R.A., Rijnsdorp, A.D., Kaiser, M.J., Suuronen, P., Hilborn, R., 2022. Trawl impacts on the relative status of biotic communities of seabed sedimentary habitats in 24 regions worldwide. Proceedings of the National Academy of Sciences U.S.A. 119.

Radko, T., McWilliams, J.C., Sutyrin, G.G., 2022. Equilibration of Baroclinic Instability in Westward Flows. Journal of Physical Oceanography 52, 21–38.

Riches, M., Snook, J., Farmer, D.K., 2022. The First Seasonal Snowfall Impacts Plant Photosynthesis and Monoterpene Emissions. Geophysical Research Letters, e2022GL100368.

Rindorf, A., Deurs, M., Howell, D., Andonegi, E., Berger, A., Bogstad, B., Cadigan, N., Elvarsson, B.Þ., Hintzen, N., Savina Roland, M., Taylor, M., Trijoulet, V., Kooten, T., Zhang, F., Collie, J., 2022. Strength and consistency of density dependence in marine fish productivity. Fish & Fisheries 1.

Robuck, A.R., Hudak, C.A., Agvent, L., Emery, G., Ryan, P.G., Perold, V., Powers, K.D., Pedersen, J., Thompson, M.A., Suca, J.J., Moore, M.J., Harms, C.A., Bugoni, L., Shield, G., Glass, T., Wiley, D.N., Lohmann, R., 2022. Birds of a Feather Eat Plastic Together: High Levels of Plastic Ingestion in Great Shearwater Adults and Juveniles Across Their Annual Migratory Cycle. Frontiers in Marine Science 8, 1754.

Roche, K.M., Sterling, A.R., Rynearson, T.A., Bertin, M.J., Jenkins, B.D., 2022. A Decade of Time Series Sampling Reveals Thermal Variation and Shifts in Pseudo-nitzschia Species Composition That Contribute to Harmful Algal Blooms in an Eastern US Estuary. Frontiers in Marine Science 9.

Rotterová, J., Edgcomb, V.P., Čepička, I., Beinart, R., 2022. Anaerobic Ciliates as a Model Group for Studying Symbioses in Oxygen-depleted Environments. Journal of Eukaryotic Microbiology, e12912.

Ruan, T., Field, J., Cousins, I., Lohmann, R., Jiang, G., 2022. Emerging Contaminants: Fluorinated Alternatives to Existing PFAS. Environmental Science & Technology 56, 6001–6003.

Shi, P., Wei, M., Barbot, S., 2022. Contribution of Viscoelastic Stress to the Synchronization of Earthquake Cycles on Oceanic Transform Faults. Journal of Geophysical Research. Solid Earth 127, 1–19.

Shiozaki, T., Inomura, K., Fujiwara, A., Hirose, Y., Hashihama, F., Harada, N., 2022. Reply to: Questioning High Nitrogen Fixation Rate Measurements in the Southern Ocean. Nature Geoscience 15, 31–32.

Slead, S., Wei, M. (Matt), 2022. Yield estimate for the January 2016 DPRK nuclear test based on InSAR and numerical modelling with mechanical heterogeneity. Geophysical Journal International 231, 2048–2054.

Sonnet, V., Guidi, L., Mouw, C.B., Puggioni, G., Ayata, S., 2022. Length, width, shape regularity, and chain structure: time series analysis of phytoplankton morphology from imagery. Limnology & Oceanography 1.

Spaulding, S.A., Potapova, M.G., Bishop, I.W., Lee, S.S., Gasperak, T.S., Jovanoska, E., Furey, P.C., Edlund, M.B., 2021. supporting taxonomists, connecting communities. Diatom Research 1–14.

Sterling, A.R., Kirk, R.D., Bertin, M.J., Rynearson, T.A., Borkman, D.G., Caponi, M.C., Carney, J., Hubbard, K.A., King, M.A., Maranda, L., McDermith, E.J., Santos, N.R., Strock, J.P., Tully, E.M., Vaverka, S.B.,* Wilson, P.D., Jenkins, B.D., 2022. Emerging harmful algal blooms caused by distinct seasonal assemblages of a toxic diatom. Limnology & Oceanography 1. (* = REU Student)

Thibodeau, P.S., Song, B., Moreno, C.M., Steinberg, D.K., 2022. Feeding ecology and microbiome of the pteropod Limacina helicina antarctica. Aquatic Microbial Ecology 88, 19–24.

Verkamp, H.J., Hammerschlag, N., Quinlan, J., Langan, J.A., Sulikowski, J.A., Simpfendorfer, C., Verkamp, H.J., Hammerschlag, N., Quinlan, J., Langan, J.A., Sulikowski, J.A., Simpfendorfer, C., 2022. Preliminary investigation of reproductive hormone profiles in the blacktip shark (Carcharhinus limbatus), a placental viviparous species, in southern Florida. Marine and Freshwater Research

Wang, W., Chen, L., Dong, Y., Kelley, K.A., Chu, F., Zhou, B., Gong, B., Zhang, J., 2022. Development of major element proxies for magmatic H2O content in oceanic basalts. Chemical Geology 610.

Wei, X., Shen, Y., 2022. P Waves Emerged From Ambient Noise Cross‐Correlation Post the 2018 Kı̄lauea Eruption Revealing Middle Crust Velocity Discontinuities Beneath the Island of Hawai’i. Geophysical Research Letters 49, 1–11.

Wei, X., Shen, Y., Caplan-Auerbach, J., Morgan, J.K., 2022. An improved earthquake catalog during the 2018 Kı̄lauea eruption from combined onshore and offshore seismic arrays. Earth and Space Science, e2021EA001979.

Wilkinson, B.P., Robuck, A.R., Lohmann, R., Pickard, H.M., Jodice, P.G.R., 2022. Urban proximity while breeding is not a predictor of perfluoroalkyl substance contamination in the eggs of brown pelicans. Science of the Total Environment 803

Wu, P., Wei, M., D’Hondt, S., 2022. Subsidence in Coastal Cities Throughout the World Observed by InSAR. Geophysical Research Letters 49, 1–11.

Wyatt, S.N., Sullivan-Watts, B.K., Watts, D.R., Sacks, L.A. Facilitating Climate Change Action in the Ocean Sciences Using the Interactive Computer Model En-ROADS. Limnology and Oceanography Bulletin.

Xie, Z., Wang, P., Wang, X., Castro-Jiménez, J., Kallenborn, R., Liao, C., Mi, W., Lohmann, R., Vila-Costa, M., Dachs, J., 2022. Organophosphate ester pollution in the oceans. Nature Reviews Earth and Environment 1–14.

Yamaguchi, A., Ashjian, C.J., Campbell, R.G., 2022. Comparison of population structure, vertical distribution and growth of sympatric, carnivorous, mesopelagic copepods, Paraeuchaeta glacialis and Heterorhabdus norvegicus, in the western Arctic Ocean. Journal of Plankton Research 44, 443–453.

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Hubeny, J.B., McCarthy, F.M.G., Lewis, J., Drljepan, M., Morissette, C., King, J.W., Cantwell, M., Hudson, N.M., Crispo, M.L., 2015. The paleohydrology of Sluice Pond, NE Massachusetts, and its regional significance. J Paleolimnol 53, 271–287. doi:10.1007/s10933-015-9824-8

Inagaki, F., Hinrichs, K.-U., Kubo, Y., Bowles, M.W., Heuer, V.B., Hong, W.-L., Hoshino, T., Ijiri, A., Imachi, H., Ito, M., Kaneko, M., Lever, M.A., Lin, Y.-S., Methé, B.A., Morita, S., Morono, Y., Tanikawa, W., Bihan, M., Bowden, S.A., Elvert, M., Glombitza, C., Gross, D., Harrington, G.J., Hori, T., Li, K., Limmer, D., Liu, C.-H., Murayama, M., Ohkouchi, N., Ono, S., Park, Y.-S., Phillips, S.C., Prieto-Mollar, X., Purkey, M., Riedinger, N., Sanada, Y., Sauvage, J., Snyder, G., Susilawati, R., Takano, Y., Tasumi, E., Terada, T., Tomaru, H., Trembath-Reichert, E., Wang, D.T., Yamada, Y., 2015. Exploring deep microbial life in coal-bearing sediment down to ~2.5 km below the ocean floor. Science 349, 420–424. doi:10.1126/science.aaa6882

Jackson, M.G., Koga, K.T., Price, A., Konter, J.G., Koppers, A. a. P., Finlayson, V.A., Konrad, K., Hauri, E.H., Kylander‐Clark, A., Kelley, K.A., Kendrick, M.A., 2015. Deeply dredged submarine HIMU glasses from the Tuvalu Islands, Polynesia: Implications for volatile budgets of recycled oceanic crust. Geochemistry, Geophysics, Geosystems 16, 3210–3234.

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Khairy, M., Muir, D., Teixeira, C., Lohmann, R., 2015. Spatial Distribution, Air–Water Fugacity Ratios and Source Apportionment of Polychlorinated Biphenyls in the Lower Great Lakes Basin. Environ. Sci. Technol.

Kane, M., 2015. Winter vertical distributions of Antarctic krill as seen through a new stereo camera system. Thesis MS–University of Rhode Island.

Le Voyer, M., Cottrell, E., Kelley, K.A., Brounce, M., Hauri, E.H., 2015. The effect of primary versus secondary processes on the volatile content of MORB glasses: An example from the equatorial Mid-Atlantic Ridge (5°N–3°S). J. Geophys. Res. Solid Earth 120, 2014JB011160. doi:10.1002/2014JB011160

Liu, Y., Wang, S., McDonough, C.A., Khairy, M., Muir, D.C.G., Helm, P.A., Lohmann, R., 2016. Gaseous and Freely-Dissolved PCBs in the Lower Great Lakes Based on Passive Sampling: Spatial Trends and Air-Water Exchange. Environ. Sci. Technol. 50, 4932–4939. doi:10.1021/acs.est.5b04586

Liu, Y., Gao, Y., Yu, N., Zhang, C., Wang, S., Ma, L., Zhao, J., Lohmann, R., 2015. Particulate matter, gaseous and particulate polycyclic aromatic hydrocarbons (PAHs) in an urban traffic tunnel of China: Emission from on-road vehicles and gas-particle partitioning. Chemosphere 134, 52–59.

Liu, Y., Wang, S., Lohmann, R., Yu, N., Zhang, C., Gao, Y., Zhao, J., Ma, L., 2015. Source apportionment of gaseous and particulate PAHs from traffic emission using tunnel measurements in Shanghai, China. Atmospheric Environment 107, 129–136.

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Malek, Anna J. 2015. An investigation of the fisheries ecosystem dynamics in Rhode Island’s nearshore waters. Thesis PhD–University of Rhode Island.

Markham, E. 2015. Emerging persistent organic pollutants (POPs) in the western South Atlantic and Antarctic biota. Thesis MS–University of Rhode Island.

McFarland, M.N., Rines, J., Sullivan, J., Donaghay, P., 2015. Impact of phytoplankton size and physiology on particulate optical properties determined with scanning flow cytometry. Marine Ecology Progress Series 531, 43–61.

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Morison, F., Menden-Deuer, S., 2015. Early spring phytoplankton dynamics in the subpolar North Atlantic: The influence of protistan herbivory. Limnol. Oceanogr. doi:10.1002/lno.10099

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Nixon, S.W., Oczkowski, A.J., Pilson, M.E.Q., Fields, L., Oviatt, C.A., Hunt, C.W., 2015. On the Response of pH to Inorganic Nutrient Enrichment in Well-Mixed Coastal Marine Waters. Estuaries and Coasts 38, 232–241.

Oczkowski, A., Thornber, C.S., Markham, E.E., Rossi, R., Ziegler, A., Rinehart, S., 2015. Testing sample stability using four storage methods and the macroalgae Ulva and Gracilaria. Limnol. Oceanogr. Methods 13, 9–14. doi:10.1002/lom3.10002

Oczkowski, A., McKinney, R., Ayvazian, S., Hanson, A., Wigand, C., Markham, E., 2015. Preliminary Evidence for the Amplification of Global Warming in Shallow, Intertidal Estuarine Waters. PLoS ONE 10, 1–18.

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Palter, J., 2015. Marine science: Storms bring ocean nutrients to light. Nature 525, 460–461.

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Scheinin, M., Riebesell, U., Rynearson, T.A., Lohbeck, K.T., Collins, S., 2015. Experimental evolution gone wild. Journal of The Royal Society Interface 12, 20150056.

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Shanahan, T.M., McKay, N.P., Hughen, K.A., Overpeck, J.T., Otto-Bliesner, B., Heil, C.W., King, J., Scholz, C.A., Peck, J., 2015. The time-transgressive termination of the African Humid Period. Nature Geoscience 8, 140–144.

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Sutyrin, G., 2015. Generation of deep eddies by a turning baroclinic jet. Deep Sea Research Part I: Oceanographic Research Papers 101, 1–6.

Talas, E., Duman, M., Küçüksezgin, F., Brennan, M.L., Raineault, N.A., 2015. Sedimentology and geochemistry of mud volcanoes in the Anaximander Mountain Region from the Eastern Mediterranean Sea. Marine Pollution Bulletin 95, 63–71.

Tamuntuan, G., Bijaksana, S., King, J., Russell, J., Fauzi, U., Maryunani, K., Aufa, N., Safiuddin, L.O., 2015. Variation of magnetic properties in sediments from Lake Towuti, Indonesia, and its paleoclimatic significance. Palaeogeography, Palaeoclimatology, Palaeoecology 420, 163–172.

Thorpe, R.B., Quesne, W.J.F.L., Luxford, F., Collie, J.S., Jennings, S., 2015. Evaluation and management implications of uncertainty in a multispecies size‐structured model of population and community responses to fishing. Methods in Ecology and Evolution 6, 49–58.

Treadaway, V. 2015. Measurement of formic and acetic acid in air by chemical ionization mass spectroscopy : airborne method development. Thesis MS–University of Rhode Island.

Turner, C. 2015. Verification of pH fluctuations in Narragansett Bay. Thesis MS–University of Rhode Island.

Ürkmez, D., Brennan, M.L., Sezgin, M., Bat, L., 2015. A brief look at the free-living Nematoda of the oxic/anoxic interface with a new genus record (Trefusia) for the Black Sea. Oceanological & Hydrobiological Studies 44, 539–551.

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Wang, N., Montagner, J.-P., Burgos, G., Capdeville, Y., Yu, D., 2015. Intrinsic versus extrinsic seismic anisotropy: Surface wave phase velocity inversion. Comptes Rendus Geoscience 347, 66–76.

Wei, M., Liu, Y., Kaneko, Y., McGuire, J.J., Bilham, R., 2015. Dynamic triggering of creep events in the Salton Trough, Southern California by regional M≥5.4 earthquakes constrained by geodetic observations and numerical simulations. Earth and Planetary Science Letters 427, 1–10.

Wells, M.L., Trainer, V.L., Smayda, T.J., Karlson, B.S.O., Trick, C.G., Kudela, R.M., Ishikawa, A., Bernard, S., Wulff, A., Anderson, D.M., Cochlan, W.P., 2015. Harmful algal blooms and climate change: Learning from the past and present to forecast the future. Harmful Algae 49, 68–93.

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Yablonsky, R., Ginis, I., Thomas, B., Tallapragada, V., Sheinin, D., Bernardet, L., 2015. Description and Analysis of the Ocean Component of NOAA’s Operational Hurricane Weather Research and Forecasting (HWRF) Model. Graduate School of Oceanography Faculty Publications.

Zhang, L., Thibodeaux, L., Jones, L., Lohmann, R., 2015. Simulation of Observed PCBs and Pesticides in the Water Column during the North Atlantic Bloom Experiment. Environ. Sci. Technol. 49, 13760–13767. doi:10.1021/acs.est.5b00223


Algeo, T.J., Meyers, P.A., Robinson, R.S., Rowe, H., Jiang, G.Q., 2014. Icehouse–greenhouse variations in marine denitrification. Biogeosciences 11, 1273–1295.

Balt, C. 2014. Subestuarine circulation and dispersion in Narragansett Bay. Thesis PhD–University of Rhode Island.

Baumann, M.S., Moran, S.B., Lomas, M.W., Kelly, R.P., Bell, D.W., Krause, J.W., 2014. Diatom control of the autotrophic community and particle export in the eastern Bering Sea during the recent cold years (2008–2010). Journal of Marine Research 72, 405–444. doi:10.1357/002224014815540679

Belkin, I.M., Hunt, G.L., Hazen, E.L., Zamon, J.E., Schick, R.S., Prieto, R., Brodziak, J., Teo, S.L.H., Thorne, L., Bailey, H., Itoh, S., Munk, P., Musyl, M.K., Willis, J.K., Zhang, W., 2014. Fronts, fish, and predators. Deep-Sea Research Part II, Topical Studies in Oceanography 107, 1–2.

Belkin, I.M., Lee, M.-A., 2014. Long-term variability of sea surface temperature in Taiwan Strait. Climatic Change 124, 821–834.

Bell, R.J., Fogarty, M.J., Collie, J.S., 2014. Stability in marine fish communities. Marine Ecology Progress Series 504, 221–239.

Berdalet, E., McManus, M. a., Ross, O. n., Burchard, H., Chavez, F. p., Jaffe, J. s., Jenkinson, I. r., Kudela, R., Lips, I., Lips, U., Lucas, A., Rivas, D., Ruiz-de la Torre, M. c., Ryan, J., Sullivan, J. m., Yamazaki, H., 2014. Understanding harmful algae in stratified systems: Review of progress and future directions. Deep-Sea Research Part II, Topical Studies in Oceanography 101, 4–20.

Bernardello, R., Marinov, I., Palter, J.B., Sarmiento, J.L., Galbraith, E.D., Slater, R.D., Bernardello, R., Marinov, I., Palter, J.B., Sarmiento, J.L., Galbraith, E.D., Slater, R.D., 2014. Response of the Ocean Natural Carbon Storage to Projected Twenty-First-Century Climate Change.

Blackstock, S. 2014. Ecological benefits of the Marine Stewardship Council ecolabel : a global analysis. Thesis MS–University of Rhode Island.

Borkman, D.G., Smayda, T.J., Schwarz, E.N., Flewelling, L.J., Tomas, C.R., 2014. Recurrent vernal presence of the toxic Alexandrium tamarense/Alexandrium fundyense (Dinoflagellata) species complex in Narragansett Bay, USA. Harmful Algae 32, 73–80.

Brounce, M.N., Kelley, K.A., Cottrell, E., 2014. Variations in Fe3+/∑Fe of Mariana Arc Basalts and Mantle Wedge fO2. J. Petrology 55, 2513–2536. doi:10.1093/petrology/egu065

Buckingham, C.E., Cornillon, P.C., Schloesser, F., Obenour, K.M., 2014. Global observations of quasi-zonal bands in microwave sea surface temperature. J. Geophys. Res. Oceans 119, 4840–4866.

Bueti, Michael R. 2014. Impact of tropical cyclones on ocean heat content and transport. Thesis PhD–University of Rhode Island.

Bueti, M.R., Ginis, I., Rothstein, L.M., Griffies, S.M., 2014. Tropical Cyclone–Induced Thermocline Warming and Its Regional and Global Impacts. J. Climate 27, 6978–6999. doi:10.1175/JCLI-D-14-00152.1

Buckingham, C.E., Cornillon, P.C., Schloesser, F., Obenour, K.M., 2014. Global observations of quasi-zonal bands in microwave sea surface temperature. J. Geophys. Res. Oceans 119, 4840–4866. doi:10.1002/2014JC010088

Cabral, R.A., Jackson, M.G., Koga, K.T., Rose-Koga, E.F., Hauri, E.H., Whitehouse, M.J., Price, A.A., Day, J.M.D., Shimizu, N., Kelley, K.A., 2014. Volatile cycling of H2O, CO2, F, and Cl in the HIMU mantle: A new window provided by melt inclusions from oceanic hot spot lavas at Mangaia, Cook Islands. Geochem. Geophys. Geosyst. 15, 4445–4467.

Cantner, K., Carey, S., Nomikou, P., 2014. Integrated volcanologic and petrologic analysis of the 1650AD eruption of Kolumbo submarine volcano, Greece. Journal of Volcanology & Geothermal Research 269, 28–43.

Cantwell, M.G., Perron, M.M., Sullivan, J.C., Katz, D.R., Burgess, R.M., King, J., 2014. Assessing organic contaminant fluxes from contaminated sediments following dam removal in an urbanized river. Environ Monit Assess 186, 4841–4855.

Carey, S., Ballard, R., Bell, K.L.C., Bell, R.J., Connally, P., Dondin, F., Fuller, S., Gobin, J., Miloslavich, P., Phillips, B., Roman, C., Seibel, B., Siu, N., Smart, C., 2014. Cold seeps associated with a submarine debris avalanche deposit at Kick’em Jenny volcano, Grenada (Lesser Antilles). Deep Sea Research Part I: Oceanographic Research Papers 93, 156–160.

Chidichimo, M.P., Donohue, K.A., Watts, D.R., Tracey, K.L., Chidichimo, M.P., Donohue, K.A., Watts, D.R., Tracey, K.L., 2014. Baroclinic Transport Time Series of the Antarctic Circumpolar Current Measured in Drake Passage.

Codiga, D.L., 2014. A Marine Autonomous Surface Craft for Long-Duration, Spatially Explicit, Multidisciplinary Water Column Sampling in Coastal and Estuarine Systems. J. Atmos. Oceanic Technol. 32, 627–641.

Collins, S., Rost, B., Rynearson, T.A., 2014. Evolutionary potential of marine phytoplankton under ocean acidification. Evol Appl 7, 140–155.

Covellone, B. M. 2014. Investigation into 3D earth structure and sources using full seismic waveforms. Thesis PhD–University of Rhode Island.

Cross, J.N., Mathis, J.T., Lomas, M.W., Moran, S.B., Baumann, M.S., Shull, D.H., Mordy, C.W., Ostendorf, M.L., Bates, N.R., Stabeno, P.J., Grebmeier, J.M., 2014. Integrated assessment of the carbon budget in the southeastern Bering Sea. Deep Sea Research Part II: Topical Studies in Oceanography, Understanding Ecosystem Processes in the Eastern Bering Sea III 109, 112–124. doi:10.1016/j.dsr2.2014.03.003

Decuollo, S., 2014. The Effect of Temperature on the Magnitude of Microzooplankton Grazing in Narragansett Bay: Separating the Effects of Community Composition and Temperature on Grazing Rates. Thesis MS–University of Rhode Island.

Droser, M.L., Gehling, J.G., Dzaugis, M.E., Kennedy, M.J., Rice, D., Allen, M.F., 2014. A New Ediacaran Fossil with a Novel Sediment Displacive Life Habit. Journal of Paleontology 88, 145–151. doi:10.1666/12-158

Druken, K.A., Kincaid, C., Griffiths, R.W., Stegman, D.R., Hart, S.R., 2014. Plume–slab interaction: The Samoa–Tonga system. Physics of the Earth and Planetary Interiors 232, 1–14.

Durbin, E.G., Casas, M.C., 2014. Early reproduction by Calanus glacialis in the Northern Bering Sea: the role of ice algae as revealed by molecular analysis. J Plankton Res 36, 523–541.

Engwell, S.L., Sparks, R.S.J., Carey, S., 2014. Physical characteristics of tephra layers in the deep sea realm: the Campanian Ignimbrite eruption. Geological Society, London, Special Publications 398, 47–64.

Farmer, D., Jan, S., Tseng, Y., Yuan, D., Lee, S., 2014. Special issue of 16th PAMS Meeting: Recent advances in the oceanography of Pacific-Asian Marginal Seas. Progress in Oceanography 121, 1–6.

Fields, L., Nixon, S.W., Oviatt, C., Fulweiler, R.W., 2014. Benthic metabolism and nutrient regeneration in hydrographically different regions on the inner continental shelf of Southern New England. Estuarine, Coastal and Shelf Science 148, 14–26. doi:10.1016/j.ecss.2014.06.007

Flinders, A.F., Ito, G., Garcia, M.O., Sinton, J.M., Kauahikaua, J., Taylor, B., 2013. Intrusive dike complexes, cumulate cores, and the extrusive growth of Hawaiian volcanoes. Geophys. Res. Lett. 40, 3367–3373. doi:10.1002/grl.50633

Friedman, C.L., Lohmann, R., 2014. Comparing sediment equilibrium partitioning and passive sampling techniques to estimate benthic biota PCDD/F concentrations in Newark Bay, New Jersey (U.S.A.). Environmental Pollution 186, 172–179.

Gallagher, S.J., Exon, N., Seton, M., Ikehara, M., Hollis, C.J., Arculus, R., D’Hondt, S., Foster, C., Gurnis, M., Kennett, J.P., McKay, R., Malakoff, A., Mori, J., Takai, K., Wallace, L., 2014. Exploring new drilling prospects in the southwest Pacific. Scientific Drilling 17, 45–50.

Gao, H., Shen, Y., 2014. Upper mantle structure of the Cascades from full-wave ambient noise tomography: Evidence for 3D mantle upwelling in the back-arc. Earth and Planetary Science Letters 390, 222–233.

Gao, K., Ginis, I., 2014. On the Generation of Roll Vortices due to the Inflection Point Instability of the Hurricane Boundary Layer Flow. J. Atmos. Sci. 71, 4292–4307. doi:10.1175/JAS-D-13-0362.1

Gastineau, R., Davidovich, N., Hansen, G., Rines, J., Wulff, A., Kaczmarska, I., Ehrman, J., Hermann, D., Maumus, F., Hardivillier, Y., Leignel, V., Jacquette, B., Méléder, V., Hallegraeff, G., Yallop, M., Perkins, R., Cadoret, J.-P., Saint-Jean, B., Carrier, G., Mouget, J.-L., 2014. Chapter Fifteen – Haslea ostrearia-like Diatoms: Biodiversity out of the Blue. Advances in Botanical Research, Sea Plants 71, 441–465.

Gioia, R., MacLeod, M., Castro-Jiménez, J., Nizzetto, L., Dachs, J., Lohmann, R., Jones, K.C., 2014. Diurnal Variability of Persistent Organic Pollutants in the Atmosphere over the Remote Southern Atlantic Ocean. Atmosphere 5, 622–634.

Hauksson, E., Kanamori, H., Stock, J., Cormier, M.-H., Legg, M., 2014. Active Pacific North America Plate boundary tectonics as evidenced by seismicity in the oceanic lithosphere offshore Baja California, Mexico. Geophys J Int 196, 1619–1630.

Huang, Y. 2014. The NO3-/-O2 respiration ratio of the deep sedimentary biosphere in the Pacific gyres. Thesis MS–University of Rhode Island.

Hughes, C. J. 2014. Air-sea momentum flux in a coupled ocean-wave model and its impact on the ocean response to a hurricane. Thesis MS–University of Rhode Island.

Insua, T.L., Spivack, A.J., Graham, D., D’Hondt, S., Moran, K., 2014. Reconstruction of Pacific Ocean bottom water salinity during the Last Glacial Maximum. Geophysical Research Letters 41, 2914–2920.

Johnston, E.N., Sparks, R.S.J., Phillips, J.C., Carey, S., 2014. Revised estimates for the volume of the Late Bronze Age Minoan eruption, Santorini, Greece. Journal of the Geological Society 171, 583–590.

Jones, J.M., Thayre, B.J., Roth, E.H., Mahoney, M., Sia, I., Merculief, K., Jackson, C., Zeller, C., Clare, M., Bacon, A., Weaver, S., Gentes, Z., Small, R.J., Stirling, I., Wiggins, S.M., Hildebrand, J.A., 2014. Ringed, Bearded, and Ribbon Seal Vocalizations North of Barrow, Alaska: Seasonal Presence and Relationship with Sea Ice. ARCTIC 67, 203–222. doi:10.14430/arctic4388

Jullion, L., Garabato, A.C.N., Bacon, S., Meredith, M.P., Brown, P.J., Torres-Valdés, S., Speer, K.G., Holland, P.R., Dong, J., Bakker, D., Hoppema, M., Loose, B., Venables, H.J., Jenkins, W.J., Messias, M.-J., Fahrbach, E., 2014. The contribution of the Weddell Gyre to the lower limb of the Global Overturning Circulation. J. Geophys. Res. Oceans.

Kang, M. 2014. Multi-species interactions in fish populations on the northwest Atlantic coastal shelf. Thesis MS–University of Rhode Island.

Keeling, P.J., Burki, F., Wilcox, H.M., Allam, B., Allen, E.E., Amaral-Zettler, L.A., Armbrust, E.V., Archibald, J.M., Bharti, A.K., Bell, C.J., Beszteri, B., Bidle, K.D., Cameron, C.T., Campbell, L., Caron, D.A., Cattolico, R.A., Collier, J.L., Coyne, K., Davy, S.K., Deschamps, P., Dyhrman, S.T., Edvardsen, B., Gates, R.D., Gobler, C.J., Greenwood, S.J., Guida, S.M., Jacobi, J.L., Jakobsen, K.S., James, E.R., Jenkins, B., John, U., Johnson, M.D., Juhl, A.R., Kamp, A., Katz, L.A., Kiene, R., Kudryavtsev, A., Leander, B.S., Lin, S., Lovejoy, C., Lynn, D., Marchetti, A., McManus, G., Nedelcu, A.M., Menden-Deuer, S., Miceli, C., Mock, T., Montresor, M., Moran, M.A., Murray, S., Nadathur, G., Nagai, S., Ngam, P.B., Palenik, B., Pawlowski, J., Petroni, G., Piganeau, G., Posewitz, M.C., Rengefors, K., Romano, G., Rumpho, M.E., Rynearson, T., Schilling, K.B., Schroeder, D.C., Simpson, A.G.B., Slamovits, C.H., Smith, D.R., Smith, G.J., Smith, S.R., Sosik, H.M., Stief, P., Theriot, E., Twary, S.N., Umale, P.E., Vaulot, D., Wawrik, B., Wheeler, G.L., Wilson, W.H., Xu, Y., Zingone, A., Worden, A.Z., 2014. The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing. PLOS Biology 12, e1001889.

Kelley, K.A., 2014. Inside Earth Runs Hot and Cold. Science 344, 51–52.

Kelly, J., Carey, S., Pistolesi, M., Rosi, M., Croff-Bell, K., Roman, C., Marani, M., 2014. Exploration of the 1891 Foerstner submarine vent site (Pantelleria, Italy): insights into the formation of basaltic balloons. Bulletin of Volcanology 76, 1–18.

Khairy, M.A., Lohmann, R., 2014. Field calibration of low density polyethylene passive samplers for gaseous POPs. Environ. Sci.: Processes Impacts 16, 414–421.

Khairy, M.A., Weinstein, M.P., Lohmann, R., 2014. Trophodynamic Behavior of Hydrophobic Organic Contaminants in the Aquatic Food Web of a Tidal River. Environ. Sci. Technol. 48, 12533–12542.

Khairy, M., Muir, D., Teixeira, C., Lohmann, R., 2014. Spatial Trends, Sources, and Air–Water Exchange of Organochlorine Pesticides in the Great Lakes Basin Using Low Density Polyethylene Passive Samplers. Environ. Sci. Technol. 48, 9315–9324.

Killea, L. 2014. Microbial community composition of marine biofilms in a northern temperate estuary. Thesis MS–University of Rhode Island.

LaFrance, M., King, J.W., Oakley, B.A., Pratt, S., 2014. A comparison of top-down and bottom-up approaches to benthic habitat mapping to inform offshore wind energy development. Continental Shelf Research, Geoscience and Habitat Mapping for Marine Renewable Energy 83, 24–44. doi:10.1016/j.csr.2014.04.007

Li, H., Shen, Y., Huang, Z., Li, X., Gong, M., Shi, D., Sandvol, E., Li, A., 2014. The distribution of the mid-to-lower crustal low-velocity zone beneath the northeastern Tibetan Plateau revealed from ambient noise tomography. J. Geophys. Res. Solid Earth 119, 2013JB010374.

Li, Q., 2014. Numerical assessment of factors affecting nonlinear internal waves in the South China Sea. Progress in Oceanography 121, 24–43.

Li, X., Li, H., Shen, Y., Gong, M., Shi, D., Sandvol, E., Li, A., 2014. Crustal Velocity Structure of the Northeastern Tibetan Plateau from Ambient Noise Surface‐Wave Tomography and Its Tectonic Implications. Bulletin of the Seismological Society of America 104, 1045–1055.

Logan, L. A. 2014. Performance analysis of an underwater wire flying profiling vehicle. Thesis MS–University of Rhode Island.

Lohmann, R., Klanova, J., Kukucka, P., Yonis, S., Bollinger, K., 2013. Concentrations, Fluxes, and Residence Time of PBDEs Across the Tropical Atlantic Ocean. Environ. Sci. Technol. 47, 13967–13975. doi:10.1021/es403494b

Lohmann, R., Belkin, I.M., 2014. Organic pollutants and ocean fronts across the Atlantic Ocean: A review. Progress in Oceanography 128, 172–184.

Loose, B., Jenkins, W.J., 2014. The five stable noble gases are sensitive unambiguous tracers of glacial meltwater. Geophys. Res. Lett. 41, 2013GL058804.

Loose, B., McGillis, W.R., Perovich, D., Zappa, C.J., Schlosser, P., 2014. A parameter model of gas exchange for the seasonal sea ice zone. Ocean Sci. 10, 17–28.

Lovely, A. 2014. The effects of sea ice on gas transfer velocities and gas partitioning between water and sea ice. Thesis MS–University of Rhode Island.

Maas, A.E., Frazar, S.L., Outram, D.M., Seibel, B.A., Wishner, K.F., 2014. Fine-scale vertical distribution of macroplankton and micronekton in the Eastern Tropical North Pacific in association with an oxygen minimum zone. J Plankton Res 36, 1557–1575.

MacDougall, J.G., Kincaid, C., Szwaja, S., Fischer, K.M., 2014. The impact of slab dip variations, gaps and rollback on mantle wedge flow: insights from fluids experiments. Geophys. J. Int. ggu053. doi:10.1093/gji/ggu053

Mackinson, B. L. 2014. Estimates of micro-, nano-, and picoplankton contributions to particle export in the northeast Pacific. Thesis MS–University of Rhode Island.

Malek, A.J., Collie, J.S., Gartland, J., 2014. Fine-scale spatial patterns in the demersal fish and invertebrate community in a northwest Atlantic ecosystem. Estuarine, Coastal and Shelf Science 147, 1–10. doi:10.1016/j.ecss.2014.05.028

Mathis, J.T., Grebmeier, J.M., Hansell, D.A., Hopcroft, R.R., Kirchman, D.L., Lee, S.H., Moran, S.B., Bates, N.R., VanLaningham, S., Cross, J.N., Cai, W.-J., 2014. Carbon Biogeochemistry of the Western Arctic: Primary Production, Carbon Export and the Controls on Ocean Acidification, in: Grebmeier, J.M., Maslowski, W. (Eds.), The Pacific Arctic Region. Springer Netherlands, pp. 223–268.

Mauzole, Yacker L. 2014. Sea spray impact on momentum exchanges at the air-sea interface during high wind conditions. Thesis MS–University of Rhode Island.

McDonough, C.A., Khairy, M.A., Muir, D.C.G., Lohmann, R., 2014. Significance of Population Centers As Sources of Gaseous and Dissolved PAHs in the Lower Great Lakes. Environ. Sci. Technol. 48, 7789–7797. doi:10.1021/es501074r

McFarland, Malcolm Neil 2014. Impact of phytoplankton community structure and function on marine particulate optical properties. Thesis PhD–University of Rhode Island.

McHugh, C., Seeber, L., Cormier, M.-H., Hornbach, M., 2014. Submarine Paleoseismology Along Populated Transform Boundaries: The Enriquillo-Plantain-Garden Fault, Canal du Sud, Haiti, and the North Anatolian Fault, Marmara Sea, Turkey. Oceanography 27, 118–131.

McHugh, C.M., Braudy, N., Çağatay, M.N., Sorlien, C., Cormier, M.-H., Seeber, L., Henry, P., 2014. Seafloor fault ruptures along the North Anatolia Fault in the Marmara Sea, Turkey: Link with the adjacent basin turbidite record. Marine Geology 353, 65–83.

McManus, M.C., Oviatt, C.A., Giblin, A.E., Tucker, J., Turner, J.T., 2014. The Western Maine Coastal Current reduces primary production rates, zooplankton abundance and benthic nutrient fluxes in Massachusetts Bay. ICES Journal of Marine Science 71, 1158–1169. doi:10.1093/icesjms/fst195

Menden-Deuer, S., Rowlett, J., 2014. Many ways to stay in the game: individual variability maintains high biodiversity in planktonic microorganisms. Journal of The Royal Society Interface 11, 20140031.

Moran, S.B., Stachelhaus, S.L., Kelly, R.P., Brush, M.J., 2013. Submarine Groundwater Discharge as a Source of Dissolved Inorganic Nitrogen and Phosphorus to Coastal Ponds of Southern Rhode Island. Estuaries and Coasts 37, 104–118. doi:10.1007/s12237-013-9663-7

Morison, Françoise. 2014. Early spring phytoplankton dynamics in the subpolar North Atlantic : the influence of heterotrophic-protist herbivory. Thesis MS–University of Rhode Island.

Morissette, Cameron E. 2014. Paleoenvironmental and paleolandscape reconstructions of Greenwich Bay Region, RI. Thesis MS–University of Rhode Island.

Murray, K.T., Orphanides, C.D., 2013. Estimating the risk of loggerhead turtle Caretta caretta bycatch in the US mid-Atlantic using fishery-independent and -dependent data. Mar Ecol Prog Ser 477, 259–270. doi:10.3354/meps10173

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Nixon, S.W., Oczkowski, A.J., Pilson, M.E.Q., Fields, L., Oviatt, C.A., Hunt, C.W., 2014. On the Response of pH to Inorganic Nutrient Enrichment in Well-Mixed Coastal Marine Waters. Estuaries and Coasts 38, 232–241. doi:10.1007/s12237-014-9805-6

Nomikou, P., Parks, M.M., Papanikolaou, D., Pyle, D.M., Mather, T.A., Carey, S., Watts, A.B., Paulatto, M., Kalnins, M.L., Livanos, I., Bejelou, K., Simou, E., Perros, I., 2014. The emergence and growth of a submarine volcano: The Kameni islands, Santorini (Greece). GeoResJ 1–2, 8–18.

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Pohl, Kari Ann. 2014. Black carbon concentrations, sources, and fluxes in the tropical Atlantic Ocean. Thesis PhD–University of Rhode Island.

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Robinson, R.S., Etourneau, J., Martinez, P.M., Schneider, R., 2014. Expansion of pelagic denitrification during early Pleistocene cooling. Earth and Planetary Science Letters 389, 52–61.

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Sanchez-Franks, A., Flagg, C.N., Rossby, T., 2014. A comparison of transport and position between the Gulf Stream east of Cape Hatteras and the Florida Current. Journal of Marine Research 72, 291–306.

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Schmidt, Courtney Elizabeth. 2014. Investigation of nitrogen cycling using stable nitrogen and oxygen isotopes in Narragansett Bay, RI. Thesis PhD–University of Rhode Island.

Schuech, R., Menden‐Deuer, S., 2014. Going ballistic in the plankton: Anisotropic swimming behavior of marine protists. Limnology and Oceanography: Fluids and Environments 4, 1–16.

Shotwell, S.K., Hanselman, D.H., Belkin, I.M., 2014. Toward biophysical synergy: Investigating advection along the Polar Front to identify factors influencing Alaska sablefish recruitment. Deep-Sea Research Part II, Topical Studies in Oceanography 107, 40–53.

Smith, B.E., Collie, J.S., Lengyel, N.L., 2014. Fish trophic engineering: Ecological effects of the invasive ascidian Didemnum vexillum (Georges Bank, northwestern Atlantic). Journal of Experimental Marine Biology & Ecology 461, 489–498.

Smith, J.N., Yeats, P.A., Knowlton, S.E., Moran, S.B., 2014. Comparison of 234Th/238U and mass balance models for estimating metal removal fluxes in the Gulf of Maine and Scotian Shelf. Continental Shelf Research 77, 107–117.

Solomon, E.A., Spivack, A.J., Kastner, M., Torres, M.E., Robertson, G., 2014. Gas hydrate distribution and carbon sequestration through coupled microbial methanogenesis and silicate weathering in the Krishna–Godavari Basin, offshore India. Marine and Petroleum Geology, Geologic implications of gas hydrates in the offshore of India: Results of the National Gas Hydrate Program Expedition 01 58, 233–253.

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Song, Y., Fang, X., King, J.W., Li, J., Naoto, I., An, Z., 2014. Magnetic parameter variations in the Chaona loess/paleosol sequences in the central Chinese Loess Plateau, and their significance for the middle Pleistocene climate transition. Quaternary Research 81, 433–444.

Stern, R.J., Ren, M., Kelley, K.A., Ohara, Y., Martinez, F., Bloomer, S.H., 2014. Basaltic volcaniclastics from the Challenger Deep forearc segment, Mariana convergent margin: Implications for tectonics and magmatism of the southernmost Izu–Bonin–Mariana arc. Island Arc 23, 368–382.

Suzuki, N., Hara, T., Sullivan, P.P., 2014. Impact of Dominant Breaking Waves on Air–Sea Momentum Exchange and Boundary Layer Turbulence at High Winds.

Taylor, D.L., Kutil, N.J., Malek, A.J., Collie, J.S., 2014. Mercury bioaccumulation in cartilaginous fishes from Southern New England coastal waters: Contamination from a trophic ecology and human health perspective. Marine Environmental Research 99, 20–33. doi:10.1016/j.marenvres.2014.05.009

Tseng, C.-T., Sun, C.-L., Belkin, I.M., Yeh, S.-Z., Kuo, C.-L., Liu, D.-C., 2014. Sea surface temperature fronts affect distribution of Pacific saury (Cololabis saira) in the Northwestern Pacific Ocean. Deep-Sea Research Part II, Topical Studies in Oceanography 107, 15–21.

Ullman, D.S., Codiga, D.L., Pfeiffer‐Herbert, A., Kincaid, C.R., 2014. An anomalous near‐bottom cross‐shelf intrusion of slope water on the southern New England continental shelf. Journal of Geophysical Research: Oceans 119, 1739–1753.

Ullman, D.S., Hebert, D., 2014. Processing of Underway CTD Data. J. Atmos. Oceanic Technol. 31, 984–998.

Walsh, Emily Ann 2014. Microbial diversity and connectivity within and between oceanic and marine sedimentary communities. Thesis PhD–University of Rhode Island.

Watson, A.C., Siemann, L.A., Hanlon, R.T., 2014. Dynamic camouflage by Nassau groupers Epinephelus striatus on a Caribbean coral reef. Journal of Fish Biology 85, 1634–1649.

Wei, M., McGuire, J.J., 2014. The Mw 6.5 offshore Northern California earthquake of 10 January 2010: Ordinary stress drop on a high‐strength fault. Geophysical Research Letters 41, 6367–6373.

Wertman, C.A., Yablonsky, R.M., Shen, Y., Merrill, J., Kincaid, C.R., Pockalny, R.A., 2014. Mesoscale convective system surface pressure anomalies responsible for meteotsunamis along the U.S. East Coast on June 13th, 2013. Sci. Rep. 4. doi:10.1038/srep07143

Whittaker, Kerry A. 2014. Biogeography and nested patterns of genetic diversity in the diatom Thalassiosira rotula. Thesis PhD–University of Rhode Island.

Williams, R.L., Wakeham, S., McKinney, R., Wishner, K.F., 2014. Trophic ecology and vertical patterns of carbon and nitrogen stable isotopes in zooplankton from oxygen minimum zone regions. Deep Sea Research Part I: Oceanographic Research Papers 90, 36–47.

Worst, J.S., Donohue, K.A., Rossby, T., 2014. A Comparison of Vessel-Mounted Acoustic Doppler Current Profiler and Satellite Altimeter Estimates of Sea Surface Height and Transports between New Jersey and Bermuda along the CMV Oleander Route. J. Atmos. Oceanic Technol. 31, 1422–1433. doi:10.1175/JTECH-D-13-00122.1

Zhu, Liwei. 2014. Identification of secondary metabolite gene clusters of bacteria from South Pacific Gyre subseafloor sediment. Thesis MS–University of Rhode Island.


Ashmankas, Cristin E. 2013. A history of sea ice in the Cenozoic Arctic Ocean. Thesis MS–University of Rhode Island.

Barakat, A.O., Khairy, M., Aukaily, I., 2013. Persistent organochlorine pesticide and PCB residues in surface sediments of Lake Qarun, a protected area of Egypt. Chemosphere 90, 2467–2476.

Baumann, Matthew S. 2013. Seasonal particle and carbon dynamics in the eastern Bering Sea. Thesis PhD–University of Rhode Island.

Baumann, M.S., Moran, S.B., Kelly, R.P., Lomas, M.W., Shull, D.H., 2013. 234Th balance and implications for seasonal particle retention in the eastern Bering Sea. Deep Sea Research Part II: Topical Studies in Oceanography, Understanding Ecosystem Processes in the Eastern Bering Sea II 94, 7–21. doi:10.1016/j.dsr2.2013.03.008

Baumann, M.S., Moran, S.B., Lomas, M.W., Kelly, R.P., Bell, D.W., 2013. Seasonal decoupling of particulate organic carbon export and net primary production in relation to sea-ice at the shelf break of the eastern Bering Sea: Implications for off-shelf carbon export. J. Geophys. Res. Oceans 118, 5504–5522. doi:10.1002/jgrc.20366

Beal, L.M., Donohue, K.A., 2013. The Great Whirl: Observations of its seasonal development and interannual variability. Journal of Geophysical Research: Oceans 118, 1–13.

Beaulieu, W.T., Costello, J.H., Klein-Macphee, G., Sullivan, B.K., 2013. Seasonality of the ctenophore Mnemiopsis leidyi in Narragansett Bay, Rhode Island. J. Plankton Res. fbt041.

Bell, K.L.C., Carey, S.N., Nomikou, P., Sigurdsson, H., Sakellariou, D., 2013. Submarine evidence of a debris avalanche deposit on the eastern slope of Santorini volcano, Greece. Tectonophysics, The Aegean: a natural laboratory for tectonics – Neotectonics 597–598, 147–160.

Bishop, S.P., Watts, D.R., Donohue, K.A., 2013. Divergent Eddy Heat Fluxes in the Kuroshio Extension at 144°–148°E. Part I: Mean Structure. J. Phys. Oceanogr. 43, 1533–1550. doi:10.1175/JPO-D-12-0221.1

Boyd, P.W., Rynearson, T.A., Armstrong, E.A., Fu, F., Hayashi, K., Hu, Z., Hutchins, D.A., Kudela, R.M., Litchman, E., Mulholland, M.R., Passow, U., Strzepek, R.F., Whittaker, K.A., Yu, E., Thomas, M.K., 2013. Marine Phytoplankton Temperature versus Growth Responses from Polar to Tropical Waters – Outcome of a Scientific Community-Wide Study. PLoS One 8. doi:10.1371/journal.pone.0063091

Brennan, M.L., King, E.M., Shaw, L.C., Walling, S.L., Valdez, F., 2013. Preliminary geochemical assessment of limestone resources and stone use at Maya sites in the Three Rivers Region, Belize. Journal of Archaeological Science 40, 3178–3192.

Brennan, M.L., Davis, D., Roman, C., Buynevich, I., Catsambis, A., Kofahl, M., Ürkmez, D., Ian Vaughn, J., Merrigan, M., Duman, M., 2013. Ocean dynamics and anthropogenic impacts along the southern Black Sea shelf examined through the preservation of pre-modern shipwrecks. Continental Shelf Research 53, 89–101.

Brennan, M.L., 2013. High-resolution Imaging of the M/S Dodekanisos Shipwreck Site off Deveboynu Burnu, Turkey. International Journal of Nautical Archaeology 42, 204–208.

Buckingham, C.E., Cornillon, P.C., 2013. The contribution of eddies to striations in absolute dynamic topography. J. Geophys. Res. Oceans 118, 448–461. doi:10.1029/2012JC008231

Buckingham, C.E. 2013. Ubiquitous zonal bands in subtropical oceans observed from space. Dissertation PhD – University of Rhode Island.

Carey, S., Nomikou, P., Bell, K.C., Lilley, M., Lupton, J., Roman, C., Stathopoulou, E., Bejelou, K., Ballard, R., 2013. CO2 degassing from hydrothermal vents at Kolumbo submarine volcano, Greece, and the accumulation of acidic crater water. Geology 41, 1035–1038.

Chappell, P.D., Whitney, L., Haddock, T.L., Menden-Deuer, S., Roy, E.G., Wells, M., Jenkins, B.D., 2013. Thalassiosira spp. community composition shifts in response to chemical and physical forcing in the northeast Pacific Ocean. Front. Microbiol. 4.

Collie, J.S., Vic Adamowicz, W.L., Beck, M.W., Craig, B., Essington, T.E., Fluharty, D., Rice, J., Sanchirico, J.N., 2013. Marine spatial planning in practice. Estuarine, Coastal and Shelf Science 117, 1–11.

Collie, J., Minto, C., Worm, B., Bell, R., 2013. Predation on Prerecruits Can Delay Rebuilding of Depleted Cod Stocks. Bulletin of Marine Science 89, 107–122.

Cottrell, E., Kelley, K.A., 2013. Redox Heterogeneity in Mid-Ocean Ridge Basalts as a Function of Mantle Source. Science 340, 1314–1317.

Curti, K.L., Collie, J.S., Legault, C.M., Link, J., 2013. Evaluating the performance of a multispecies statistical catch-at-age model. Canadian Journal of Fisheries and Aquatic Sciences 70, 470–484.

D’Hondt, S., Inagaki, F., Alvarez Zarikian, C., the IODP Expedition 329 Scientific Party, 2013. IODP Expedition 329: Life and Habitability Beneath the Seafloor of the South Pacific Gyre. Scientific Drilling 15, 4–10.

D’Hondt, S., 2013. Geochemistry: Subsurface sustenance. Nature Geosci 6, 426–427.

Duffy, J.E., Amaral-Zettler, L.A., Fautin, D.G., Paulay, G., Rynearson, T.A., Sosik, H.M., Stachowicz, J.J., 2013. Envisioning a Marine Biodiversity Observation Network. BioScience 63, 350–361.

Dunlea, A.G., Murray, R.W., Harris, R.N., Vasiliev, M.A., Evans, H., Spivack, A.J., D’Hondt, S., 2013. Assessment and Use of NGR Instrumentation on the JOIDES Resolutionto Quantify U, Th, and K Concentrations in Marine Sediment. Scientific Drilling 15, 57–63.

Eddy, Elizabeth N. 2013. Characterizing the benthic invertebrate communities of the mixed-coarse intertidal habitat in Boston Harbor. Thesis MS–University of Rhode Island.

Esch, M.E.S., Shull, D.H., Devol, A.H., Moran, S.B., 2013. Regional patterns of bioturbation and iron and manganese reduction in the sediments of the southeastern Bering Sea. Deep-Sea Research Part II, Topical Studies in Oceanography 94, 80–94.

Etourneau, J., Robinson, R.S., Martinez, P., Schneider, R., 2013. Equatorial Pacific peak in biological production regulated by nutrient and upwelling during the late Pliocene/early Pleistocene cooling. Biogeosciences 10, 5663–5670.

Firing, Y.L., Chereskin, T.K., Watts, D.R., Tracey, K.L., Provost, C., 2013. Computation of Geostrophic Streamfunction, Its Derivatives, and Error Estimates from an Array of CPIES in Drake Passage. J. Atmos. Oceanic Technol. 31, 656–680.

Flinders, A.F., Ito, G., Garcia, M.O., Sinton, J.M., Kauahikaua, J., Taylor, B., 2013. Intrusive dike complexes, cumulate cores, and the extrusive growth of Hawaiian volcanoes. Geophys. Res. Lett. 40, 3367–3373.

Galbraith, E.D., Kienast, M., The NICOPP working group Members, Galbraith, E.D., Kienast, M., Albuquerque, A.L., Altabet, M.A., Batista, F., Bianchi, D., Calvert, S.E., Contreras, S., Crosta, X., Pol-Holz, R.D., Dubois, N., Etourneau, J., Francois, R., Hsu, T.-C., Ivanochko, T., Jaccard, S.L., Kao, S.-J., Kiefer, T., Kienast, S., Lehmann, M.F., Martinez, P., McCarthy, M., Meckler, A.N., Mix, A., Möbius, J., Pedersen, T.F., Pichevin, L., Quan, T.M., Robinson, R.S., Ryabenko, E., Schmittner, A., Schneider, R., Schneider-Mor, A., Shigemitsu, M., Sinclair, D., Somes, C., Studer, A.S., Tesdal, J.-E., Thunell, R., Yang, J.-Y.T., 2013. The acceleration of oceanic denitrification during deglacial warming. Nature Geoscience 6, 579–584.

Gale, A., Dalton, C.A., Langmuir, C.H., Su, Y., Schilling, J.-G., 2013. The mean composition of ocean ridge basalts. Geochem. Geophys. Geosyst. 14, 489–518.

Graff, J., R Forschner-Dancause, S., Menden-Deuer, S., Long, R., Rowley, D., 2013. Vibrio cholerae Exploits Sub-Lethal Concentrations of a Competitor-Produced Antibiotic to Avoid Toxic Interactions. Frontiers in microbiology 4, 8.

Hain, J.H.W., Hampp, J.D., McKenney, S.A., Albert, J.A., Kenney, R.D., 2013. Swim Speed, Behavior, and Movement of North Atlantic Right Whales (Eubalaena glacialis) in Coastal Waters of Northeastern Florida, USA. PLoS ONE 8, 1–9.

Harvey, Elizabeth L., 2013. The impact of predator-prey relationships on the formation of harmful algal blooms in Heterosigma akashiwo. Thesis PhD–University of Rhode Island.

Harvey, E.L., Jeong, H.J., Menden-Deuer, S., 2013. Avoidance and attraction: Chemical cues influence predator-prey interactions of planktonic protists. Limnol. Oceanogr. 58, 1176–1184. doi:10.4319/lo.2013.58.4.1176

Hartwell, Anne M. 2013. A reconstruction of d15N of deep ocean nitrate in the past using pore fluid. Thesis MS–University of Rhode Island.

Heffner, Leanna. 2013. Responses of nitrogen cycling to nutrient enrichment in New England salt marshes over an annual cycle. Thesis PhD–University of Rhode Island.

Henderson, M. Elisabeth. 2013. Impacts of changing inshore water temperatures on phenology and thermal preferences of fish species. Thesis MS–University of Rhode Island.

Huang, X., Bruce, B., Buchan, A., Congdon, C.B., Cramer, C.L., Jennings, S.F., Hongmei Jiang, Zenglu Li, McClure, G., McMullen, R., Moore, J.H., Nanduri, B., Peckham, J., Perkins, A., Polson, S.W., Rekepalli, B., Salem, S., Specker, J., Wunsch, D., Xiong, D., 2013. No-boundary thinking in bioinformatics research. BioData Mining 6, 3–11.

Jiang, M., Borkman, D.G., Scott Libby, P., Townsend, D.W., Zhou, M., 2014. Nutrient input and the competition between Phaeocystis pouchetii and diatoms in Massachusetts Bay spring bloom. Journal of Marine Systems 134, 29–44.

Kandlbauer, J., Carey, S.N., Sparks, R.S.J., 2013. The 1815 Tambora ash fall: implications for transport and deposition of distal ash on land and in the deep sea. Bull Volcanol 75, 1–11.

Kaufman, Melissa R. S. 2013. Evaluating ocean model resolution and initialization under hurricane conditions. Thesis MS–University of Rhode Island.

Kelly, Joshua. 2013. 1891 AD submarine eruptive processes and geochemical studies of floating scoria at Foerstner volcano, Pantelleria. Thesis MS–University of Rhode Island.

Kelley, K.A., Kingsley, R., Schilling, J.-G., 2013. Composition of plume-influenced mid-ocean ridge lavas and glasses from the Mid-Atlantic Ridge, East Pacific Rise, Galápagos Spreading Center, and Gulf of Aden. Geochem. Geophys. Geosyst. 14, 223–242.

Khairy, M.A., Lohmann, R., 2013a. Source apportionment and risk assessment of polycyclic aromatic hydrocarbons in the atmospheric environment of Alexandria, Egypt. Chemosphere 91, 895–903.

Khairy, M.A., Lohmann, R., 2013b. Feasibility of using low density polyethylene sheets to detect atmospheric organochlorine pesticides in Alexandria, Egypt. Environmental Pollution 181, 151–158.

Kilias, S.P., Nomikou, P., Papanikolaou, D., Polymenakou, P.N., Godelitsas, A., Argyraki, A., Carey, S., Gamaletsos, P., Mertzimekis, T.J., Stathopoulou, E., Goettlicher, J., Steininger, R., Betzelou, K., Livanos, I., Christakis, C., Bell, K.C., Scoullos, M., 2013. New insights into hydrothermal vent processes in the unique shallow-submarine arc-volcano, Kolumbo (Santorini), Greece. Scientific Reports 3, 2421.

Kim, Hyewon. 2013. Future-pCO2 Conditions alter the Movement Behaviors of the Toxic Raphidophyte Heterosigma akashiwo: Implications for Harmful Algal Bloom Formation in an Acidifying Ocean. Thesis MS–University of Rhode Island.

Kim, H., Menden-Deuer, S., 2013. Reliability of rapid, semi-automated assessment of plankton abundance, biomass, and growth rate estimates: Coulter Counter versus light microscope measurements. Limnology and Oceanography: Methods 11, 382–393. doi:10.4319/lom.2013.11.382

Kim, H., Spivack, A.J., Menden-Deuer, S., 2013. pH alters the swimming behaviors of the raphidophyte Heterosigma akashiwo: Implications for bloom formation in an acidified ocean. Harmful Algae 26, 1–11. doi:10.1016/j.hal.2013.03.004

Kincaid, C., Druken, K.A., Griffiths, R.W., Stegman, D.R., 2013. Bifurcation of the Yellowstone plume driven by subduction-induced mantle flow. Nature Geoscience 6, 395–399.

Knorr, Kelly J. 2013. Distribution, variability, and trends in wind characteristics in New England coastal areas. Thesis MS–University of Rhode Island.

Kurt, H., Sorlien, C.C., Seeber, L., Steckler, M.S., Shillington, D.J., Cifci, G., Cormier, M.-H., Dessa, J.-X., Atgin, O., Dondurur, D., Demirbag, E., Okay, S., Imren, C., Gurcay, S., Carton, H., 2013. Steady late quaternary slip rate on the Cinarcik section of the North Anatolian fault near Istanbul, Turkey. Geophys. Res. Lett. 40, 4555–4559.

Lado-Insua, T., Moran, K., Kulin, I., Farrington, S., Newman, J.B., Becker, K., 2013. SCIMPI: a new borehole observatory. Scientific Drilling 57–61.

Lengyel, Nicole L. 2013. Characterizing the spread and impacts of the invasive colonial tunicate Didemnum vexillum on Georges Bank. Thesis MS–University of Rhode Island.

Li, L., Li, A., Shen, Y., Sandvol, E.A., Shi, D., Li, H., Li, X., 2013. Shear wave structure in the northeastern Tibetan Plateau from Rayleigh wave tomography. J. Geophys. Res. Solid Earth 118, 4170–4183.

Lohmann, R., Stapleton, H.M., Hites, R.A., 2013. Science Should Guide TSCA Reform. Environ. Sci. Technol. 47, 8995–8996.

Lohmann, R., Klanova, J., Pribylova, P., Liskova, H., Yonis, S., Bollinger, K., 2013. PAHs on a West-to-East Transect Across the Tropical Atlantic Ocean. Environ. Sci. Technol. 47, 2570–2578. doi:10.1021/es304764e

Lohmann, R., Klanova, J., Kukucka, P., Yonis, S., Bollinger, K., 2013. Concentrations, Fluxes, and Residence Time of PBDEs Across the Tropical Atlantic Ocean. Environ. Sci. Technol. 47, 13967–13975. doi:10.1021/es403494b

Luo, Y., Rothstein, L., Liu, Q., Zhang, S., 2013. Climatic variability of the circulation in the Rhode Island Sound: A modeling study. J. Geophys. Res. Oceans 118, 4072–4091. doi:10.1002/jgrc.20285

Loring, P.H., Paton, P.W.C., McWilliams, S.R., McKinney, R.A., Oviatt, C.A., 2013. Densities of Wintering Scoters in Relation to Benthic Prey Assemblages in a North Atlantic Estuary. Waterbirds 36, 144–155.

Lucas, K., Colin, S.P., Costello, J.H., Katija, K., Klos, E., 2013. Fluid Interactions That Enable Stealth Predation by the Upstream-Foraging Hydromedusa Craspedacusta sowerbyi. Biological Bulletin 225, 60–70.

Luo, Y., Rothstein, L., Liu, Q., Zhang, S., 2013. Climatic variability of the circulation in the Rhode Island Sound: A modeling study. J. Geophys. Res. Oceans 118, 4072–4091.

Lyle, Marion Lynn. 2013. Geochemical constraints on mantle sources and melting conditions in Pacific back-arc basins. Thesis PhD–University of Rhode Island.

Maranda, L., Cox, A.M., Campbell, R.G., Smith, D.C., 2013. Chlorine dioxide as a treatment for ballast water to control invasive species: Shipboard testing. Marine Pollution Bulletin 75, 76–89.

Moor, J.M. de, Fischer, T.P., Sharp, Z.D., King, P.L., Wilke, M., Botcharnikov, R.E., Cottrell, E., Zelenski, M., Marty, B., Klimm, K., Rivard, C., Ayalew, D., Ramirez, C., Kelley, K.A., 2013. Sulfur degassing at Erta Ale (Ethiopia) and Masaya (Nicaragua) volcanoes: Implications for degassing processes and oxygen fugacities of basaltic systems. Geochemistry, Geophysics, Geosystems 14, 4076–4108.

Moran, S. b., Dulaiova, H., 2013. Marine Chemistry special issue: Radium and radon tracers in aquatic systems: An update. Marine Chemistry 156, 1–2.

Moran, S.B., Stachelhaus, S.L., Kelly, R.P., Brush, M.J., 2013. Submarine Groundwater Discharge as a Source of Dissolved Inorganic Nitrogen and Phosphorus to Coastal Ponds of Southern Rhode Island. Estuaries and Coasts 37, 104–118. doi:10.1007/s12237-013-9663-7

Muir, D., Lohmann, R., 2013. Water as a new matrix for global assessment of hydrophilic POPs. TrAC Trends in Analytical Chemistry 46, 162–172.

Murray, K.T., Orphanides, C.D., 2013. Estimating the risk of loggerhead turtle Caretta caretta bycatch in the US mid-Atlantic using fishery-independent and -dependent data. Mar Ecol Prog Ser 477, 259–270.

Nie, J., Jackson, M., King, J., Fang, X., 2013. Characterizing the superparamagnetic grain distribution of Chinese red-clay sequences by thermal fluctuation tomography. Global and Planetary Change, Magnetic iron minerals in sediments and their relation to geologic processes, climate, and the geomagnetic field 110, Part C, 364–367. doi:10.1016/j.gloplacha.2013.04.012

Nie, J., Song, Y., King, J.W., Zhang, R., Fang, X., 2013. Six million years of magnetic grain-size records reveal that temperature and precipitation were decoupled on the Chinese Loess Plateau during ~ 4.5–2.6 Ma. Quaternary Research 79, 465–470.

Nowicki, B.L., Sullivan-Watts, B., Shim, M.K., Young, B., Pockalny, R., 2013. Factors Influencing Science Content Accuracy in Elementary Inquiry Science Lessons. Res Sci Educ 43, 1135–1154.

Obenour, Kelsey Marie. 2013. Temporal trends in global sea surface temperature fronts. Thesis MS–University of Rhode Island.

Orphanides, C.D., Palka, D.L., 2013. REVIEW Analysis of harbor porpoise gillnet bycatch, compliance, and enforcement trends in the US northwestern Atlantic, January 1999 to May 2010. Endang Species Res 20, 251–269. doi:10.3354/esr00499

Pető, M.K., Mukhopadhyay, S., Kelley, K.A., 2013. Heterogeneities from the first 100 million years recorded in deep mantle noble gases from the Northern Lau Back-arc Basin. Earth and Planetary Science Letters 369–370, 13–23.

Plank, T., Kelley, K.A., Zimmer, M.M., Hauri, E.H., Wallace, P.J., 2013. Why do mafic arc magmas contain ∼4wt% water on average? Earth and Planetary Science Letters 364, 168–179.

Prieto-Davó, A., Villarreal-Gómez, L.J., Forschner-Dancause, S., Bull, A.T., Stach, J.E.M., Smith, D.C., Rowley, D.C., Jensen, P.R., 2013. Targeted search for actinomycetes from nearshore and deep-sea marine sediments. FEMS Microbiology Ecology 84, 510–518.

Prytulak, J., Nielsen, S.G., Ionov, D.A., Halliday, A.N., Harvey, J., Kelley, K.A., Niu, Y.L., Peate, D.W., Shimizu, K., Sims, K.W.W., 2013. The stable vanadium isotope composition of the mantle and mafic lavas. Earth and Planetary Science Letters 365, 177–189.

Raineault, N.A., Trembanis, A.C., Miller, D.C., Capone, V., 2013. Interannual changes in seafloor surficial geology at an artificial reef site on the inner continental shelf. Continental Shelf Research 58, 67–78.

Reitsma, P.J., Adelman, D., Lohmann, R., 2013. Challenges of Using Polyethylene Passive Samplers to Determine Dissolved Concentrations of Parent and Alkylated PAHs under Cold and Saline Conditions. Environ. Sci. Technol. 47, 10429–10437. doi:10.1021/es402528q

Ren, H., Brunelle, B.G., Sigman, D.M., Robinson, R.S., 2013. Diagenetic aluminum uptake into diatom frustules and the preservation of diatom-bound organic nitrogen. Marine Chemistry 155, 92–101.

Ribeiro, J.M., Stern, R.J., Kelley, K.A., Martinez, F., Ishizuka, O., Manton, W.I., Ohara, Y., 2013a. Nature and distribution of slab‐derived fluids and mantle sources beneath the Southeast Mariana forearc rift. Geochemistry, Geophysics, Geosystems 14, 4585–4607.

Ribeiro, J.M., Stern, R.J., Martinez, F., Ishizuka, O., Merle, S.G., Kelley, K., Anthony, E.Y., Ren, M., Ohara, Y., Reagan, M., Girard, G., Bloomer, S., 2013b. Geodynamic evolution of a forearc rift in the southernmost Mariana Arc. Island Arc 22, 453–476.

Rochet, M.-J., Collie, J.S., Trenkel, V.M., 2013. How Do Fishing and Environmental Effects Propagate Among and Within Functional Groups? Bulletin of Marine Science 89, 285–315.

Rubin, C.B., Menden-Deuer, S., Harvey, E., Fishenden, J., 2013. Traces: Plankton on the Move.

Rubin-Blum, M., Tsadok, R., Shemesh, E., Goodman-Tchernov, B., Austin, J., Coleman, D., Ben-Avraham, Z., Gruber, D., Tchernov, D., 2014. Distribution of the Lamellibrachia spp. (Siboglinidae, Annelida) and their trophosome endosymbiont phylotypes in the Mediterranean Sea. Marine Biology 161, 1229–1239.

Rubinstein, N., Fazio, A.M., Scasso, R.A., Carey, S., Immenhauser, A., 2013. Association of phosphate with rhyolite glass in marine Neogene tuffs from Patagonia, Argentina. Sedimentology 60, 1007–1016.

Ruddock, K., August, P.V., Damon, C., LaBash, C., Rubinoff, P., Robadue, D., 2013. Conservation in the Context of Climate Change: Practical Guidelines for Land Protection at Local Scales. PLoS ONE 8, 1–9.

Ruge, Zoe. 2013. Air-water exchange and trends of persistent bioaccumulative toxics (PBTs) across Lake Superior. Thesis MS–University of Rhode Island.

Ruzicka, J.J., Steele, J.H., Gaichas, S.K., Ballerini, T., Gifford, D.J., Brodeur, R.D., Hofmann, E.E., 2013. Analysis of Energy Flow in US GLOBEC Ecosystems Using End-to-End Models. Oceanography 26, 82–97.

Rynearson, T.A., Richardson, K., Lampitt, R.S., Sieracki, M.E., Poulton, A.J., Lyngsgaard, M.M., Perry, M.J., 2013. Major contribution of diatom resting spores to vertical flux in the sub-polar North Atlantic. Deep Sea Research Part I: Oceanographic Research Papers 82, 60–71.

Sauvage, Justine. 2013. Determination of in-situ dissolved inorganic carbon and alkalinity in marine sedimentary interstitial water. Thesis MS–University of Rhode Island.

Schick, R.S., Kraus, S.D., Rolland, R.M., Knowlton, A.R., Hamilton, P.K., Pettis, H.M., Kenney, R.D., Clark, J.S., 2013. Using Hierarchical Bayes to Understand Movement, Health, and Survival in the Endangered North Atlantic Right Whale. PLoS ONE 8, e64166.

Schmidt, C.E., Heikes, B.G., 2013. Aqueous Carbon Monoxide Cycling in a Fjord-Like Estuary. Estuaries and Coasts 37, 751–762. doi:10.1007/s12237-013-9722-0

Shanahan, T.M., McKay, N., Overpeck, J.T., Peck, J.A., Scholz, C., Heil, C.W., King, J., 2013. Spatial and temporal variability in sedimentological and geochemical properties of sediments from an anoxic crater lake in West Africa: Implications for paleoenvironmental reconstructions. Palaeogeography, Palaeoclimatology, Palaeoecology 374, 96–109.

Smith, B.E., Collie, J.S., Lengyel, N.L., 2013. Effects of chronic bottom fishing on the benthic epifauna and diets of demersal fishes on northern Georges Bank. Marine Ecology Progress Series 472, 199–217.

Steele, J.H., Aydin, K., Gifford, D.J., Hofmann, E.E., 2013. Construction kits or virtual worlds; Management applications of E2E models. Journal of Marine Systems 109–110, 103–108.

Strom, S.L., Harvey, E.L., Fredrickson, K.A., Menden-Deuer, S., 2013. Broad Salinity Tolerance as a Refuge from Predation in the Harmful Raphidophyte Alga Heterosigma akashiwo (Raphidophyceae). J. Phycol. 49, 20–31. doi:10.1111/jpy.12013

Suzuki, N., Hara, T., Sullivan, P.P., 2013. Impact of Breaking Wave Form Drag on Near-Surface Turbulence and Drag Coefficient over Young Seas at High Winds.

Talapatra, S., Hong, J., McFarland, M., Nayak, A.R., Zhang, C., Katz, J., Sullivan, J., Twardowski, M., Rines, J., Donaghay, P., 2013. Characterization of biophysical interactions in the water column using in situ digital holography. Marine Ecology Progress Series 473, 29–51.

Verleye, T.J., Martinez, P., Robinson, R.S., Louwye, S., 2013. Changes in the source of nutrients associated with oceanographic dynamics offshore southern Chile (41°S) over the last 25,000years. Quaternary Research 80, 495–501.

Watts, D.R., Kennelly, M.A., Donohue, K.A., Tracey, K.L., Chereskin, T.K., Weller, R.A., Victoria, I., 2013. Four Current Meter Models Compared in Strong Currents in Drake Passage.

White, H.K., Li Xu, Hartmann, P., Quinn, J.G., Reddy, C.M., 2013. Unresolved Complex Mixture (UCM) in Coastal Environments Is Derived from Fossil Sources. Environmental Science & Technology 47, 726–731.

Williams, Rebecca. 2013. Trophic ecology of oxygen minimum zone zooplankton revealed by carbon and nitrogen stable isotopes. Thesis PhD–University of Rhode Island.

Wishner, K.F., Outram, D.M., Seibel, B.A., Daly, K.L., Williams, R.L., 2013. Zooplankton in the eastern tropical north Pacific: Boundary effects of oxygen minimum zone expansion. Deep Sea Research Part I: Oceanographic Research Papers 79, 122–140.

Zhang, L., Dickhut, R., DeMaster, D., Pohl, K., Lohmann, R., 2013. Organochlorine Pollutants in Western Antarctic Peninsula Sediments and Benthic Deposit Feeders. Environ. Sci. Technol. 47, 5643–5651. doi:10.1021/es303553h

Zeng, X., Belkin, I.M., Peng, S., Li, Y., 2014. East Hainan upwelling fronts detected by remote sensing and modelled in summer. International Journal of Remote Sensing 35, 4441–4451.

Zu, T., Wang, D., Yan, C., Belkin, I., Zhuang, W., Chen, J., 2013. Evolution of an anticyclonic eddy southwest of Taiwan. Ocean Dynamics 63, 519–531.


Alexander, H., Jenkins, B.D., Rynearson, T.A., Saito, M.A., Mercier, M.L., Dyhrman, S.T., 2012. Identifying reference genes with stable expression from high throughput sequence data. Front Microbiol 3. doi:10.3389/fmicb.2012.00385

Bailey, Jennifer. 2012. Pseudocalanus copepods in the Bering Sea : species identification, intraspecific diversity and biogeography. Thesis MS–University of Rhode Island.

Bell, R.J., Collie, J.S., Jamu, D., Banda, M., 2012. Changes in the biomass of chambo in the southeast arm of Lake Malawi: A stock assessment of Oreochromis spp. Journal of Great Lakes Research 38, 720–729. doi:10.1016/j.jglr.2012.09.022

Benskin, J.P., Ahrens, L., Muir, D.C.G., Scott, B.F., Spencer, C., Rosenberg, B., Tomy, G., Kylin, H., Lohmann, R., Martin, J.W., 2012. Manufacturing Origin of Perfluorooctanoate (PFOA) in Atlantic and Canadian Arctic Seawater. Environmental Science & Technology 46, 677–685.

Benskin, J.P., Muir, D.C.G., Scott, B.F., Spencer, C., De Silva, A.O., Kylin, H., Martin, J.W., Morris, A., Lohmann, R., Tomy, G., Rosenberg, B., Taniyasu, S., Yamashita, N., 2012. Perfluoroalkyl Acids in the Atlantic and Canadian Arctic Oceans. Environmental Science & Technology 46, 5815–5823.

Bishop, Stuart P. 2012. The role of eddy fluxes in the Kuroshio extension at 144° – 148° E. Thesis PhD–University of Rhode Island.

Bishop, S.P., Watts, D.R., Park, J.-H., Hogg, N.G., 2012. Evidence of Bottom-Trapped Currents in the Kuroshio Extension Region. J. Phys. Oceanogr. 42, 321–328. doi:10.1175/JPO-D-11-0144.1

Borkman, D.G., Smayda, T.J., Tomas, C.R., York, R., Strangman, W., Wright, J.L.C., 2012. Toxic Alexandrium peruvianum (Balech and de Mendiola) Balech and Tangen in Narragansett Bay, Rhode Island (USA). Harmful Algae 19, 92–100.

Brounce, M., Feineman, M., LaFemina, P., Gurenko, A., 2012. Insights into crustal assimilation by Icelandic basalts from boron isotopes in melt inclusions from the 1783–1784 Lakagígar eruption. Geochimica et Cosmochimica Acta 94, 164–180. doi:10.1016/j.gca.2012.07.002

Chereskin, T.K., Donohue, K.A., Watts, D.R., 2012. cDrake: Dynamics and Transport of the Antarctic Circumpolar Current in Drake Passage. Oceanography 25, 134–135.

Cleary, A.C., Durbin, E.G., Rynearson, T.A., 2012. Krill feeding on sediment in the Gulf of Maine (North Atlantic). Mar Ecol Prog Ser 455, 157–172. doi:10.3354/meps09632

Cox, A.M., Gomez-Chiarri, M., 2012. Vibrio parahaemolyticus in Rhode Island Coastal Ponds and the Estuarine Environment of Narragansett Bay. Appl. Environ. Microbiol. 78, 2996–2999. doi:10.1128/AEM.07519-11

Corman, S.S., Roman, C.T., King, J.W., Appleby, P.G., 2012. Salt Marsh Mosquito-Control Ditches: Sedimentation, Landscape Change, and Restoration Implications. Journal of Coastal Research 874–880. doi:10.2112/JCOASTRES-D-11-00012.1

Covellone, B.M., Savage, B., 2012. A Quantitative Comparison between 1D and 3D Source Inversion Methodologies: Application to the Middle East. Bulletin of the Seismological Society of America 102, 2189–2199. doi:10.1785/0120110278

Dempsey, J. P., Xie, Y., Adamson, R. M., Farmer, D. M., 2012. Fracture of a ridged multi-year Arctic sea ice floe. Cold Regions Science & Technology 76–77, 63–68.

Dunbar, R.B., Alberts, J., Ashjian, C., Asper, V., Chayes, D., Domack, E., Ducklow, H., Huber, B., Lawver, L., Oliver, D., Russell, D., Smith, C.R., Vernet, M., 2012. A New US Polar Research Vessel for the Twenty-First Century. Oceanography 25, 204–207.

Durbin, E.G., Casas, M.C., Rynearson, T.A., 2012. Copepod feeding and digestion rates using prey DNA and qPCR. J. Plankton Res. 34, 72–82.

Dyhrman, S.T., Jenkins, B.D., Rynearson, T.A., Saito, M.A., Mercier, M.L., Alexander, H., Whitney, L.P., Drzewianowski, A., Bulygin, V.V., Bertrand, E.M., Wu, Z., Benitez-Nelson, C., Heithoff, A., 2012. The Transcriptome and Proteome of the Diatom Thalassiosira pseudonana Reveal a Diverse Phosphorus Stress Response. PLoS ONE 7, e33768. doi:10.1371/journal.pone.0033768

Forschner-Dancause, S., LaPlante, K., Smith, D.C., Rowley, D.C., 2012. Going Deep for Drug Discovery: An Ocean to Bedside Approach to Explore Sub-Seafloor Microbes for the Next Generation of Antibiotics. Medicine & Health Rhode Island 95, 292–293.

Friedman, C.L., Cantwell, M.G., Lohmann, R., 2012. Passive sampling provides evidence for Newark Bay as a source of polychlorinated dibenzo-p-dioxins and furans to the New York/New Jersey, USA, atmosphere. Environmental Toxicology and Chemistry 31, 253–261. doi:10.1002/etc.742

Fulweiler, R., Nixon, S., 2012. Net sediment N fluxes in a southern New England estuary: variations in space and time. Biogeochemistry 111, 111–124.

Gowen, R.J., Tett, P., Smayda, T.J., 2012. Phytoplankton and the balance of nature: An opinion. Estuarine Coastal & Shelf Science 113, 317–323.

Greene, A.D., Watts, D.R., Sutyrin, G.G., Sasaki, H., 2012. Evidence of Vertical Coupling between the Kuroshio Extension and Topographically Controlled Deep Eddies. Journal of Marine Research 70, 719–747.

Greene, C.H., Monger, B.C., McGarry, L.P., Connelly, M.D., Schnepf, N.R., Pershing, A.J., Belkin, I.M., Fratantoni, P.S., Mountain, D.G., Pickart, R.S., Ji, R., Bisagni, J.J., Changsheng Chen, Hakkinen, S.M. a., Haidvogel, D.B., Jia Wang, Head, E., Smith, P., Conversi, A., 2012. Recent Arctic Climate Change and Its Remote Forcing of Northwest Atlantic Shelf Ecosystems. Oceanography 25, 208–213.

Halm, H., Lam, P., Ferdelman, T.G., Lavik, G., Dittmar, T., LaRoche, J., D’Hondt, S., Kuypers, M.M., 2012. Heterotrophic organisms dominate nitrogen fixation in the South Pacific Gyre. ISME Journal: Multidisciplinary Journal of Microbial Ecology 6, 1238–1249.

Harvey, E.L., Menden-Deuer, S., 2012. Predator-Induced Fleeing Behaviors in Phytoplankton: A New Mechanism for Harmful Algal Bloom Formation? PLoS ONE 7, e46438. doi:10.1371/journal.pone.0046438

Heiss, E.M., Fields, L., Fulweiler, R.W., 2012. Directly measured net denitrification rates in offshore New England sediments. Continental Shelf Research 45, 78–86. doi:10.1016/j.csr.2012.06.002

Higgins, M.B., Robinson, R.S., Husson, J.M., Carter, S.J., Pearson, A., 2012. Dominant eukaryotic export production during ocean anoxic events reflects the importance of recycled NH4+. Proceedings of the National Academy of Sciences U.S.A. 109, 2269–2274.

James-Pirri, M.-J., Erwin, R.M., Prosser, D.J., Taylor, J.D., 2012. Responses of Salt Marsh Ecosystems to Mosquito Control Management Practices along the Atlantic Coast (U.S.A.). Restoration Ecology 20, 395–404.

James-Pirri, M.-J., Veillette, Philip, A., Leschen, Alison, S., 2012. Selected hemolymph constituents of captive, biomedically bled, and wild caught adult female American horseshoe crabs (Limulus polyphemus). Marine & Freshwater Behaviour & Physiology 45, 281–289.

Ji, R., Ashjian, C.J., Campbell, R.G., Chen, C., Gao, G., Davis, C.S., Cowles, G.W., Beardsley, R.C., 2012. Life history and biogeography of Calanus copepods in the Arctic Ocean: An individual-based modeling study. Progress in Oceanography 96, 40–56.

Kallmeyer, J., Pockalny, R., Adhikari, R.R., Smith, D.C., D’Hondt, S., 2012. Global distribution of microbial abundance and biomass in subseafloor sediment. Proc. Nat. Acad. Sci. 201203849.

Kelley, K.A., Cottrell, E., 2012. The influence of magmatic differentiation on the oxidation state of Fe in a basaltic arc magma. Earth and Planetary Science Letters 329–330, 109–121.

Khairy, M.A., Lohmann, R., 2012. Field Validation of Polyethylene Passive Air Samplers for Parent and Alkylated PAHs in Alexandria, Egypt. Environmental Science & Technology 46, 3990–3998.

Kim, S., Kang, S., Zhang, C.-I., Seo, H., Kang, M., Kim, J.J., 2012. Comparison of fisheries yield and oceanographic features at the southern boundaries of the western and eastern Subarctic Pacific Ocean. ICES Journal of Marine Science / Journal du Conseil 69, 1141–1147.

King, E.M., Brady, J.E., Shaw, L.C., Cobb, A.B., Kieffer, C.L., Brennan, M.L., Harris, C.L., 2012. Small Caves and Sacred Geography: A Case Study from the Prehispanic Maya Site of Maax Na, Belize. Latin American Antiquity 23, 611–628.

Lawrence, C., Menden-Deuer, S., 2012. Drivers of protistan grazing pressure: seasonal signals of plankton community composition and environmental conditions. Marine Ecology Progress Series 459, 39–52. doi:10.3354/meps09771

Lee, J.H., Matsuno, T., Wimbush, M., Yuan, D., Chang, K.-I., 2012. The PAMS (Pacific–Asian Marginal Seas) study. Progress in Oceanography, Special Issue: Pacific Asian Marginal Seas 105, 1–3.

Liang, X., Sandvol, E., Chen, Y.J., Hearn, T., Ni, J., Klemperer, S., Shen, Y., Tilmann, F., 2012. A complex Tibetan upper mantle: A fragmented Indian slab and no south-verging subduction of Eurasian lithosphere. Earth & Planetary Science Letters 333–334, 101–111.

Lin Zhang, Bidleman, T., Perry, M.J., Lohmann, R., 2012. Fate of Chiral and Achiral Organochlorine Pesticides in the North Atlantic Bloom Experiment. Environmental Science & Technology 46, 8106–8114.

Lohmann, R., 2012. Critical Review of Low-Density Polyethylene’s Partitioning and Diffusion Coefficients for Trace Organic Contaminants and Implications for Its Use As a Passive Sampler. Environmental Science & Technology 46, 606–618.

Lohmann, R., Klanova, J., Kukucka, P., Yonis, S., Bollinger, K., 2012. PCBs and OCPs on a East-to-West Transect: The Importance of Major Currents and Net Volatilization for PCBs in the Atlantic Ocean. Environ. Sci. Technol. 46, 10471–10479. doi:10.1021/es203459e

Lomas, M. W., Moran, S. B., Casey, J.R., Bell, D. W., Tiahlo, M., Whitefield, J., Kelly, R. P., Mathis, J. T., Cokelet, E. D., 2012. Spatial and seasonal variability of primary production on the Eastern Bering Sea shelf. Deep-Sea Research Part II, Topical Studies in Oceanography 65–70, 126–140.

Lomstein, B.A., Langerhuus, A.T., D’Hondt, S., Jørgensen, B.B., Spivack, A.J., 2012. Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment. Nature 484, 101–104.

Lytle, M.L., Kelley, K.A., Hauri, E.H., Gill, J.B., Papia, D., Arculus, R.J., 2012. Tracing mantle sources and Samoan influence in the northwestern Lau back-arc basin. Geochem. Geophys. Geosyst. 13, Q10019. doi:10.1029/2012GC004233

Maas, A., Wishner, K., Seibel, B., 2012. Metabolic suppression in thecosomatous pteropods as an effect of low temperature and hypoxia in the eastern tropical North Pacific. Marine Biology 159, 1955–1967.

Mateo, I., Durbin, E.G., Bengtson, D.A., Kingsley, R., Swart, P.K., Durant, D., 2012. Spatial and Temporal Variation in Otolith Chemistry for Tautog (Tautoga onitis) along the US Northeast Coast. Northeastern Naturalist 19, 201–216.

McManus, M. Conor, 2012. Coastal current effects on primary production rates and implications for ecosystem dynamics in Massachusetts Bay. Thesis MS–University of Rhode Island.

Moran, S. B., Lomas, M. W., Kelly, R. P., Gradinger, R., Iken, K., Mathis, J. T., 2012. Seasonal succession of net primary productivity, particulate organic carbon export, and autotrophic community composition in the eastern Bering Sea. Deep-Sea Research Part II, Topical Studies in Oceanography 65–70, 84–97.

Nomikou, P., Carey, S., Papanikolaou, D., Croff Bell, K., Sakellariou, D., Alexandri, M., Bejelou, K., 2012. Submarine volcanoes of the Kolumbo volcanic zone NE of Santorini Caldera, Greece. Global and Planetary Change, Coupled deep Earth and surface processes in System Earth: monitoring, reconstruction and process modeling 90–91, 135–151.

Ohara, Y., Reagan, M.K., Fujikura, K., Watanabe, H., Michibayashi, K., Ishii, T., Stern, R.J., Pujana, I., Martinez, F., Girard, G., Ribeiro, J., Brounce, M., Komori, N., Kino, M., 2012. A serpentinite-hosted ecosystem in the Southern Mariana Forearc. Proc. Nat. Acad. Sci. 109, 2831–2835. doi:10.1073/pnas.1112005109

Pelletier, M.C., Gold, A.J., Gonzalez, L., Oviatt, C., 2012. Application of multiple index development approaches to benthic invertebrate data from the Virginian Biogeographic Province, USA. Ecological Indicators 23, 176–188.

Piecuch, C.G., Rynearson, T.A., 2012. Quantifying Dispersal and Connectivity of Surface Waters Using Observational Lagrangian Measurements. J. Atmos. Oceanic Technol. 29, 1127–1138. doi:10.1175/JTECH-D-11-00172.1

Ren, Y., Stuart, G. w., Houseman, G. a., Dando, B., Ionescu, C., Hegedüs, E., Radovanović, S., Shen, Y., 2012. Upper mantle structures beneath the Carpathian–Pannonian region: Implications for the geodynamics of continental collision. Earth & Planetary Science Letters 349–350, 139–152.

Rooney, T.O., Hanan, B.B., Graham, D.W., Furman, T., Blichert-Toft, J., Schilling, J.-G., 2012. Upper Mantle Pollution during Afar Plume–Continental Rift Interaction. Journal of Petrology 53, 365–389.

Rosenfeld, D., Woodley, W.L., Khain, A., Cotton, W.R., Carri, G., Ginis, I., Golden, J.H., 2012. Aerosol Effects on Microstructure and Intensity of Tropical Cyclones. Bulletin of the American Meteorological Society 93, 987–1001.

Røy, H., Kallmeyer, J., Adhikari, R.R., Pockalny, R., Jørgensen, B.B., D’Hondt, S., 2012. Aerobic Microbial Respiration in 86-Million-Year-Old Deep-Sea Red Clay. Science 336, 922–925.

Sacks, V.P., Lohmann, R., 2012. Freely dissolved PBDEs in water and porewater of an urban estuary. Environmental Pollution 162, 287–293. doi:10.1016/j.envpol.2011.11.028

Shanahan, T.M., Beck, J.W., Overpeck, J.T., McKay, N.P., Pigati, J.S., Peck, J.A., Scholz, C.A., Heil, C.W., King, J., 2012. Late Quaternary sedimentological and climate changes at Lake Bosumtwi Ghana: New constraints from laminae analysis and radiocarbon age modeling. Palaeogeography, Palaeoclimatology, Palaeoecology 361–362, 49–60.

Sheldon, Dane P. H. 2012. Stratigraphy of a proposed wind farm site southeast of Block Island : utilization of borehole samples, downhole logging, and seismic profiles. Thesis MS–University of Rhode Island.

Smith, L.M., Silver, C.M., Oviatt, C.A., 2012. Quantifying variation in water column photosynthetic quotient with changing field conditions in Narragansett Bay, RI, USA. J. Plankton Res. 34, 437–442. doi:10.1093/plankt/fbs011

Stachelhaus, S.L., Moran, S.B., 2012. A simple differential diffusion model to account for the discrepancy between 223Ra- and 224Ra-based eddy diffusivities. J. Geophys. Res. 117, C03004. doi:10.1029/2011JC007500

Stachelhaus, S.L., Moran, S.B., Kelly, R.P., 2012. An evaluation of the efficacy of radium isotopes as tracers of submarine groundwater discharge to southern Rhode Island’s coastal ponds. Marine Chemistry 130–131, 49–61. doi:10.1016/j.marchem.2012.01.001

Stachelhaus, S.L., Moran, S.B., Ullman, D.S., Kelly, R.P., 2012. Cross-shelf mixing and mid-shelf front dynamics in the Mid-Atlantic Bight evaluated using the radium quartet. Journal of Marine Research 70, 141–172. doi:10.1357/002224012800502426

Steele, J.H., Hofmann, E.E., Gifford, D.J., 2012. End-to-end models: Management applications. Progress in Oceanography 102, 1–4.

Tsao, L.E., Robinson, R.S., Higgins, M.B., Pearson, A., 2012. Nitrogen isotope ratio of cyanobacterial chlorophyll: Chemostat vs. batch culture. Organic Geochemistry 49, 96–99.

Tucker, J.M., Mukhopadhyay, S., Schilling, J.-G., 2012. The heavy noble gas composition of the depleted MORB mantle (DMM) and its implications for the preservation of heterogeneities in the mantle. Earth & Planetary Science Letters 355–356, 244–254.

Vinhateiro, N., Sullivan, K.A., McNally, C.G., 2012. Training for the Next Generation of Coastal Management Practitioners. Journal of Coastal Research 1297–1302. doi:10.2112/JCOASTRES-D-11-00178.1

Whitney, M.M., Codiga, D.L., Ullman, D.S., Mcmanus, P.M., Jiorle, R., 2012. Tidal Cycles in Stratification and Shear and Their Relationship to Gradient Richardson Number and Eddy Viscosity Variations in Estuaries. Journal of Physical Oceanography 42, 1124–1133.

Whittaker, K.A., Rignanese, D.R., Olson, R.J., Rynearson, T.A., 2012. Molecular subdivision of the marine diatom Thalassiosira rotula in relation to geographic distribution, genome size, and physiology. BMC Evol Biol 12, 209. doi:10.1186/1471-2148-12-209

Yao, J., Belkin, I., Chen, J., Wang, D., 2012. Thermal fronts of the southern South China Sea from satellite and in situ data. International Journal of Remote Sensing 33, 7458–7468.

Yonis, Shifra R. 2012. Vertical profiles of PAH concentrations in Narragansett Bay using passive samplers. Thesis MS–University of Rhode Island.

Zhang, L., Bidleman, T., Perry, M.J., Lohmann, R., 2012. Fate of Chiral and Achiral Organochlorine Pesticides in the North Atlantic Bloom Experiment. Environ. Sci. Technol. 46, 8106–8114. doi:10.1021/es3009248

Zhang, W., Shen, Y., Zhao, L., 2012. Three-dimensional anisotropic seismic wave modelling in spherical coordinates by a collocated-grid finite-difference method. Geophys J Int 188, 1359–1381.


Baxter, C.D.P., Ravi Sharma, M.S., Moran, K., Vaziri, H., Narayanasamy, R., 2011. Use of [formula] as a Failure Criterion for Weakly Cemented Soils. Journal of Geotechnical & Geoenvironmental Engineering 137, 161–170.

Brennan, M.L., 2011. Geological Survey of Historical Cemeteries, Jamestown, Rhode Island, 1693-1900. Historical Archaeology 45, 102–114.

Brennan, M.L., Ballard, R.D., Bell, K.L.C., Piechota, D., 2011. Archaeological oceanography and environmental characterization of shipwrecks in the Black Sea. Geological Society of America Special Papers 473, 179–188. doi:10.1130/2011.2473(11)

Cottrell, E., Kelley, K.A., 2011. The oxidation state of Fe in MORB glasses and the oxygen fugacity of the upper mantle. Earth and Planetary Science Letters 305, 270–282.

Czerski, H., Vagle, S., Farmer, D.M., Hall-Patch, N., 2011. Improvements to the methods used to measure bubble attenuation using an underwater acoustical resonator. Journal of the Acoustical Society of America 130, 3421–3430.

Davis, X.J., Rothstein, L.M., Dewar, W.K., Menemenlis, D., 2011. Numerical Investigations of Seasonal and Interannual Variability of North Pacific Subtropical Mode Water and Its Implications for Pacific Climate Variability. Journal of Climate 24, 2648–2665.

DiMilla, P.A., Nixon, S.W., Oczkowski, A.J., Altabet, M.A., McKinney, R.A., 2011. Some challenges of an “upside down” nitrogen budget – Science and management in Greenwich Bay, RI (USA). Marine Pollution Bulletin 62, 672–680. doi:10.1016/j.marpolbul.2011.01.031

Dorrington, T., Villamil, L., Gómez-Chiarri, M., 2011. Upregulation in response to infection and antibacterial activity of oyster histone H4. Fish & Shellfish Immunology 30, 94–101.

Druken, K.A., Kincaid, C., Griffiths, R.W., 2013. Directions of seismic anisotropy in laboratory models of mantle plumes. Geophys. Res. Lett. 40, 3544–3549. doi:10.1002/grl.50671

Farmer, D.M., Alford, M.H., Lien, R.-C., Yang, Y.J., Chang, M.-H., Li, Q., 2011. From Luzon Strait to Dongsha Plateau: Stages in the Life of an Internal Wave. Oceanography 24, 64–77.

Forrester, G.E., O’Connell-Rodwell, C., Baily, P., Forrester, L.M., Giovannini, S., Harmon, L., Karis, R., Krumholz, J., Rodwell, T., Jarecki, L., 2011. Evaluating Methods for Transplanting Endangered Elkhorn Corals in the Virgin Islands. Restoration Ecology 19, 299–306.

Gouin, T., Roche, N., Lohmann, R., Hodges, G., 2011. A Thermodynamic Approach for Assessing the Environmental Exposure of Chemicals Absorbed to Microplastic. Environmental Science & Technology 45, 1466–1472.

Graff, J.R., Rynearson, T.A., 2011. Extraction method influences the recovery of phytoplankton pigments from natural assemblages. Limnol. Oceanogr. Methods 9, 129–139. doi:10.4319/lom.2011.9.129

Harvey, M.J., Law, C.S., Smith, M.J., Hall, J.A., Abraham, E.R., Stevens, C.L., Hadfield, M.G., Ho, D.T., Ward, B., Archer, S.D., Cainey, J.M., Currie, K.I., Devries, D., Ellwood, M.J., Hill, P., Jones, G.B., Katz, D., Kuparinen, J., Macaskill, B., Main, W., 2011. The SOLAS air–sea gas exchange experiment (SAGE) 2004. Deep-Sea Research Part II, Topical Studies in Oceanography 58, 753–763.

Higgins, M.B., Wolfe-Simon, F., Robinson, R.S., Qin, Y., Saito, M.A., Pearson, A., 2011. Paleoenvironmental implications of taxonomic variation among δ15N values of chloropigments. Geochimica et Cosmochimica Acta 75, 7351–7363.

Horn, M.G., Beucher, C.P., Robinson, R.S., Brzezinski, M.A., 2011. Southern Ocean nitrogen and silicon dynamics during the last deglaciation. Earth and Planetary Science Letters 310, 334–339. doi:10.1016/j.epsl.2011.08.016

Horn, M.G., Robinson, R.S., Rynearson, T.A., Sigman, D.M., 2011. Nitrogen isotopic relationship between diatom-bound and bulk organic matter of cultured polar diatoms. Paleoceanography 26, PA3208. doi:10.1029/2010PA002080

Huang, F., Lundstrom, C.C., Sigurdsson, H., Zhang, Z., 2011. U-series disequilibria in Kick’em Jenny submarine volcano lavas: A new view of time-scales of magmatism in convergent margins. Geochimica et Cosmochimica Acta 75, 195–212.

Hubeny, J.B., King, J.W., Reddin, M., 2011. Northeast US precipitation variability and North American climate teleconnections interpreted from late Holocene varved sediments. Proceedings of the National Academy of Sciences U.S.A. 108, 17895–17900.

Johnson, C.L., Runge, J.A., Curtis, K.A., Durbin, E.G., Hare, J.A., Incze, L.S., Link, J.S., Melvin, G.D., O’Brien, T.D., Van Guelpen, L., 2011. Biodiversity and Ecosystem Function in the Gulf of Maine: Pattern and Role of Zooplankton and Pelagic Nekton. PLoS ONE 6, 1–18.

Klánová, J., Diamond, M., Jones, K., Lammel, G., Lohmann, R., Pirrone, N., Scheringer, M., Balducci, C., Bidleman, T., Bláha, K., Bláha, L., Booij, K., Bouwman, H., Breivik, K., Eckhardt, S., Fiedler, H., Garrigues, P., Harner, T., Holoubek, I., Hung, H., 2011. Identifying the Research and Infrastructure Needs for the Global Assessment of Hazardous Chemicals Ten Years after Establishing the Stockholm Convention, in: Environmental Science & Technology. Presented at the Environmental Science & Technology, pp. 7617–7619.

Lambert, M.K., Friedman, C., Luey, P., Lohmann, R., 2011. Role of Black Carbon in the Sorption of Polychlorinated Dibenzo-p-dioxins and Dibenzofurans at the Diamond Alkali Superfund Site, Newark Bay, New Jersey. Environmental Science & Technology 45, 4331–4338.

Li, W.K.W., Andersen, R.A., Gifford, D.J., Incze, L.S., Martin, J.L., Pilskaln, C.H., Rooney-Varga, J.N., Sieracki, M.E., Wilson, W.H., Wolff, N.H., 2011. Planktonic Microbes in the Gulf of Maine Area. PLoS ONE 6, 1–13.

Li, Q., Farmer, D.M., 2011. The Generation and Evolution of Nonlinear Internal Waves in the Deep Basin of the South China Sea. J. Phys. Oceanogr. 41, 1345–1363. doi:10.1175/2011JPO4587.1

Lohmann, R., Dapsis, M., Morgan, E.J., Dekany, V., Luey, P.J., 2011. Determining Air–Water Exchange, Spatial and Temporal Trends of Freely Dissolved PAHs in an Urban Estuary Using Passive Polyethylene Samplers. Environmental Science & Technology 45, 2655–2662.

Mateo, I., Durbin, E., Appeldoorn, R., Adams, A., Juanes, F., Durant, D., 2011. Inferred Growth of Juvenile French Grunts, Haemulon Flavolineatum, and Schoolmaster, Lutjanus Apodus, in Mangrove and Seagrass Habitats. Bulletin of Marine Science 87, 339–350.

Okkonen, S.R., Ashjian, C.J., Campbell, R.G., Clarke, J.T., Moore, S.E., Taylor, K.D., 2011. Satellite observations of circulation features associated with a bowhead whale feeding ‘hotspot’ near Barrow, Alaska. Remote Sensing of Environment 115, 2168–2174.

Olsen, S., Olsen, E., Schaefer, N., 2011. Governance baselines as a basis for adaptive marine spatial planning. Journal of Coastal Conservation (Springer Science & Business Media B.V.) 15, 313–322.

Parman, S.W., Grove, T.L., Kelley, K.A., Plank, T., 2011. Along-Arc Variations in the Pre-Eruptive H2O Contents of Mariana Arc Magmas Inferred from Fractionation Paths. Journal of Petrology 52, 257–278.

Perron, M.M., Burgess, R.M., Ho, K.T., Pelletier, M.C., Friedman, C.L., Cantwell, M.G., Shine, J.P., 2011. Limitations of reverse polyethylene samplers (RePES) for evaluating toxicity of field contaminated sediments. Chemosphere 83, 247–254.

Ravi Sharma, M. s., Baxter, C.D.P., Hoffmann, W., Moran, K., Vaziri, H., 2011. Characterization of weakly cemented sands using nonlinear failure envelopes. International Journal of Rock Mechanics & Mining Sciences 48, 146–151.

Ravi Sharma, M.S., Baxter, C.D.P., Moran, K., Vaziri, H., Narayanasamy, R., 2011. Strength of Weakly Cemented Sands from Drained Multistage Triaxial Tests. Journal of Geotechnical & Geoenvironmental Engineering 137, 1202–1210.

Rochet, M.-J., Collie, J.S., Jennings, S., Hall, S.J., 2011. Does selective fishing conserve community biodiversity? Predictions from a length-based multispecies model. Canadian Journal of Fisheries & Aquatic Sciences 68, 469–486.

Roman, C., Inglis, G., McGilvray, B., 2011. Lagrangian floats as sea floor imaging platforms. Continental Shelf Research 31, 1592–1598.

Sacks, V.P., Lohmann, R., 2011. Development and Use of Polyethylene Passive Samplers To Detect Triclosans and Alkylphenols in an Urban Estuary. Environ. Sci. Technol. 45, 2270–2277. doi:10.1021/es1040865

Sanford, T.B., Kelly, K.A., Farmer, D.M., 2011. Sensing the ocean. Physics Today 64, 24–28.

Scholz, C. A., Cohen, A. S., Johnson, T. C., King, J., Talbot, M. R., Brown, E. T., 2011. Scientific drilling in the Great Rift Valley: The 2005 Lake Malawi Scientific Drilling Project — An overview of the past 145,000 years of climate variability in Southern Hemisphere East Africa. Palaeogeography, Palaeoclimatology, Palaeoecology 303, 3–19.

Sherman, K., O’Reilly, J., Belkin, I.M., Melrose, C., Friedland, K.D., 2011. The application of satellite remote sensing for assessing productivity in relation to fisheries yields of the world’s large marine ecosystems. ICES Journal of Marine Science / Journal du Conseil 68, 667–676.

Smayda, T.J., 2011. Cryptic planktonic diatom challenges phytoplankton ecologists. Proceedings of the National Academy of Sciences U.S.A. 108, 4269–4270.

Steele, J.H., Gifford, D.J., Collie, J.S., 2011. Comparing species and ecosystem-based estimates of fisheries yields. Fisheries Research 111, 139–144.

Stewart, G., Moran, S.B., Lomas, M.W., Kelly, R.P., 2011. Direct comparison of 210Po, 234Th and POC particle-size distributions and export fluxes at the Bermuda Atlantic Time-series Study (BATS) site. Journal of Environmental Radioactivity 102, 479–489.

Stolt, M., Brad1ey, M., Turenne, J., Payne, M., Scherer, E., Cicchetti, G., Shumchenia, E., Guarinelio, M., King, J., Boothroyd, J., Oakley, B., Thornber, C., August, P., 2011. Mapping Shallow Coastal Ecosystems: A Case Study of a Rhode Island Lagoon. Journal of Coastal Research 1–15.

Sullivan, J., Bollinger, K., Caprio, A., Cantwell, M., Appleby, P., King, J., Ligouis, B., Lohmann, R., 2011. Enhanced Sorption of PAHs in Natural-Fire-Impacted Sediments from Oriole Lake, California. Environmental Science & Technology 45, 2626–2633.

Sutyrin, G., Herbette, S., Carton, X., 2011. Deformation and splitting of baroclinic eddies encountering a tall seamount. Geophysical & Astrophysical Fluid Dynamics 105, 478–505.

Turner, J.T., Borkman, D.G., Scott Libby, P., 2011. Zooplankton trends in Massachusetts Bay, USA: 1998–2008. Journal of Plankton Research 33, 1066–1080.

Wehrmann, L.M., Risgaard-Petersen, N., Schrum, H.N., Walsh, E.A., Huh, Y., Ikehara, M., Pierre, C., D’Hondt, S., Ferdelman, T.G., Ravelo, A.C., Takahashi, K., Zarikian, C.A., 2011. Coupled organic and inorganic carbon cycling in the deep subseafloor sediment of the northeastern Bering Sea Slope (IODP Exp. 323). Chemical Geology 284, 251–261.

Zhigang Z., Johnson, D.L., Schwartz, L.M., 2011. Simulating the time-dependent diffusion coefficient in mixed-pore-size materials. Physical Review E: Statistical, Nonlinear & Soft Matter Physics 84, 031129–1.


Ashjian, C.J., Braund, S.R., Campbell, R.G., George, J.C. Kruse, J., Maslowski, W., Moore, S.E., Nicolson, C.R., Okkonen, S.R., Sherr, B.F., Sherr, E.B., Spitz, Y.H., 2010. Climate Variability, Oceanography, Bowhead Whale Distribution, and Iñupiat Subsistence Whaling near Barrow, Alaska. Arctic 63, 179–194.

Baschek, B., Farmer, D.M., 2010. Gas Bubbles as Oceanographic Tracers. Journal of Atmospheric & Oceanic Technology 27, 241–245.

Bogucki, D., Carr, M.-E., Drennan, WilliamM., Woiceshyn, P., Hara, T., Schmeltz, M., 2010. Preliminary and novel estimates of CO2 gas transfer using a satellite scatterometer during the 2001GasEx experiment. International Journal of Remote Sensing 31, 75–92.

Brush, M.J., Nixon, S.W., 2010. Modeling the role of macroalgae in a shallow sub-estuary of Narragansett Bay, RI (USA). Ecological Modelling 221, 1065–1079.

Buckley, L.J., Buckley, L.B., 2010. Toward linking ocean models to fish population dynamics. Progress in Oceanography 84, 85–88.

Cantwell, M.G., Wilson, B.A., Zhu, J., Wallace, G.T., King, J.W., Olsen, C.R., Burgess, R.M., Smith, J.P., 2010. Temporal trends of triclosan contamination in dated sediment cores from four urbanized estuaries: Evidence of preservation and accumulation. Chemosphere 78, 347–352.

Czerski, H., Deane, G.B., 2010. Contributions to the acoustic excitation of bubbles released from a nozzle. Journal of the Acoustical Society of America 128, 2625–2634.

Dong-Ping Wang, Flagg, C.N., Donohue, K., Rossby, H.T., 2010. Wavenumber Spectrum in the Gulf Stream from Shipboard ADCP Observations and Comparison with Altimetry Measurements. Journal of Physical Oceanography 40, 840–844.

Donohue, K.A., Watts, D.R., Tracey, K.L., Greene, A.D., Kennelly, M., Donohue, K.A., Watts, D.R., Tracey, K.L., Greene, A.D., Kennelly, M., 2010. Mapping Circulation in the Kuroshio Extension with an Array of Current and Pressure Recording Inverted Echo Sounders.

Galindo, H.M., Pfeiffer-Herbert, A.S., McManus, M.A., Chao, Y., Chai, F., Palumbi, S.R., 2010. Seascape genetics along a steep cline: using genetic patterns to test predictions of marine larval dispersal. Molecular Ecology 19, 3692–3707.

Hou, J., Huang, Y.,  Brodsky, C., Alexandre, M.R., McNichol, A.P., King, J.W., Feng Sheng Hu, Ji Shen, 2010. Radiocarbon Dating of Individual Lignin Phenols: A New Approach for Establishing Chronology of Late Quaternary Lake Sediments. Analytical Chemistry 82, 7119–7126.

Han, W., Fang, X., Yang, S., King, J., 2010. Differences between East Asian and Indian monsoon climate records during MIS3 attributed to differences in their driving mechanisms: Evidence from the loess record in the Sichuan basin, southwestern China and other continental and marine climate records. Quaternary International 218, 94–103.

Heil, C.W., King, J.W., Zárate, M.A., Schultz, P.H., 2010. Climatic interpretation of a 1.9 Ma environmental magnetic record of loess deposition and soil formation in the central eastern Pampas of Buenos Aires, Argentina. Quaternary Science Reviews 29, 2705–2718.

Higgins, M.B., Robinson, R.S., Carter, S.J., Pearson, A., 2010. Evidence from chlorin nitrogen isotopes for alternating nutrient regimes in the Eastern Mediterranean Sea. Earth & Planetary Science Letters 290, 102–107.

Higgins, M.B., Robinson, R.S., Casciotti, K.L., McIlvin, M.R., Pearson, A., 2010. A Method for Determining the Nitrogen Isotopic Composition of Porphyrins. Analytical Chemistry 81, 184–192.

Holliday, D.V., Greenlaw, C.F., Donaghay, P.L., 2010. Acoustic scattering in the coastal ocean at Monterey Bay, CA, USA: Fine-scale vertical structures. Continental Shelf Research 30, 81–103.

James-Pirri, M.-J., 2010. Seasonal movement of the American horseshoe crab Limulus polyphemus in a semi-enclosed bay on Cape Cod, Massachusetts (USA) as determined by acoustic telemetry. Current Zoology 56, 575–586.

Kelley, K.A., Plank, T., Newman, S., Stolper, E.M., Grove, T.L., Parman, S., Hauri, E.H., 2010. Mantle Melting as a Function of Water Content beneath the Mariana Arc. Journal of Petrology 51, 1711–1738.

Kissel, C., Laj, C., Sigurdsson, H., Guillou, H., 2010. Emplacement of magma in Eastern Iceland dikes: Insights from magnetic fabric and rock magnetic analyses. Journal of Volcanology & Geothermal Research 191, 79–92.

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